RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 LEXMQ3ZCV2 418 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 CEP55Q53EZ4 464 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 FBXO47Q5MNV8 452 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 IER5Q5VY09 327 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 DNAJB3Q8WWF6 145 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 PCYT2Q99447 389 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 ATG7O95352 703 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 GHRP10912 638 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 SLC26A2P50443 739 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 STAT5BP51692 787 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 ADCY7P51828 1080 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 MRPS6P82932 125 aaKnown RBP17.12■□□□□ 0.33
RNF40-209ENST00000566703 PUS10Q3MIT2 529 aaKnown RBP17.12■□□□□ 0.33
RNF40-209ENST00000566703 TIGD5Q53EQ6 642 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 MCTP2Q6DN12 878 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 TYW1BQ6NUM6 668 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 TSHZ1Q6ZSZ6 1077 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 NIPA1Q7RTP0 329 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 NME8Q8N427 588 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 ANO3Q9BYT9 981 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 FAM217BQ9NTX9 383 aaPredicted RBP17.12■□□□□ 0.33
RNF40-209ENST00000566703 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 RWDD3Q9Y3V2 267 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 PCDHA2Q9Y5H9 948 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 MICAL3Q7RTP6 2002 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 VCANP13611 3396 aa17.12■□□□□ 0.33
RNF40-209ENST00000566703 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 C5orf67F2Z3F1 127 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 STXBP3O00186 592 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 ARP10275 920 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 SREBF1P36956 1147 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 CLK2P49760 499 aaKnown RBP17.11■□□□□ 0.33
RNF40-209ENST00000566703 ACTR2P61160 394 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 FTHL17Q9BXU8 183 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 LMAN2LQ9H0V9 348 aa17.11■□□□□ 0.33
RNF40-209ENST00000566703 AGO4Q9HCK5 861 aaKnown RBP17.11■□□□□ 0.33
RNF40-209ENST00000566703 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
RNF40-209ENST00000566703 SIP14410 1827 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 NCK2O43639 380 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 CDC45O75419 566 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 BMPR1AP36894 532 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 IGBP1P78318 339 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 KCNB2Q92953 911 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 TRPV2Q9Y5S1 764 aa17.1■□□□□ 0.33
RNF40-209ENST00000566703 KAT6AQ92794 2004 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 IGKV6D-21A0A0A0MT36 114 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 SMIM35A0A1B0GVV1 85 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 GOLGA8BA8MQT2 603 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 M0QZ92 97 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 ZNF76P36508 570 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 COL19A1Q14993 1142 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 NEK9Q8TD19 979 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 ZNF689Q96CS4 500 aaPredicted RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 C11orf84Q9BUA3 381 aaPredicted RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 NSUN3Q9H649 340 aaKnown RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 AGO3Q9H9G7 860 aaKnown RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 KDM3AQ9Y4C1 1321 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 COL4A4P53420 1690 aaPredicted RBP17.09■□□□□ 0.33
RNF40-209ENST00000566703 DOCK5Q9H7D0 1870 aa17.09■□□□□ 0.33
RNF40-209ENST00000566703 ADGRA3Q8IWK6 1321 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 ESYT2A0FGR8 921 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 POTEB3A0JP26 581 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 HBP1O60381 514 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 DGKIO75912 1065 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 CYP3A4P08684 503 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 KCNA5P22460 613 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 CDC27P30260 824 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.32
RNF40-209ENST00000566703 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
RNF40-209ENST00000566703 FAM160B1Q5W0V3 765 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 POTEBQ6S5H4 581 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 FBXL16Q8N461 479 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 PLVAPQ9BX97 442 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 CELF4Q9BZC1 486 aaKnown RBP17.08■□□□□ 0.32
RNF40-209ENST00000566703 EPHX3Q9H6B9 360 aa17.08■□□□□ 0.32
RNF40-209ENST00000566703 RC3H2Q9HBD1 1191 aaKnown RBP17.08■□□□□ 0.32
RNF40-209ENST00000566703 SPTBN5Q9NRC6 3674 aaKnown RBP17.08■□□□□ 0.32
RNF40-209ENST00000566703 STAG3L1P0CL83 205 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 SCG2P13521 617 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms