RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ARP10275 920 aa23■■□□□ 1.27
CLN6-207ENST00000566347 MRPS5P82675 430 aaKnown RBP23■■□□□ 1.27
CLN6-207ENST00000566347 FAM117BQ6P1L5 589 aa23■■□□□ 1.27
CLN6-207ENST00000566347 MYOCDQ8IZQ8 938 aa23■■□□□ 1.27
CLN6-207ENST00000566347 TGS1Q96RS0 853 aaKnown RBP23■■□□□ 1.27
CLN6-207ENST00000566347 ZMYND12Q9H0C1 365 aa23■■□□□ 1.27
CLN6-207ENST00000566347 NEFLP07196 543 aa22.99■■□□□ 1.27
CLN6-207ENST00000566347 ACTR2P61160 394 aa22.99■■□□□ 1.27
CLN6-207ENST00000566347 AKAP17AQ02040 695 aaKnown RBP22.99■■□□□ 1.27
CLN6-207ENST00000566347 GRB10Q13322 594 aa22.99■■□□□ 1.27
CLN6-207ENST00000566347 RUFY4Q6ZNE9 571 aa22.99■■□□□ 1.27
CLN6-207ENST00000566347 ASB2Q96Q27 587 aa22.99■■□□□ 1.27
CLN6-207ENST00000566347 IFIH1Q9BYX4 1025 aaKnown RBP22.99■■□□□ 1.27
CLN6-207ENST00000566347 C6orf50Q9HD87 102 aa22.99■■□□□ 1.27
CLN6-207ENST00000566347 LINC01553A4QN01 128 aa22.98■■□□□ 1.27
CLN6-207ENST00000566347 ERVK-21P61565 698 aa22.98■■□□□ 1.27
CLN6-207ENST00000566347 HTRA4P83105 476 aaPredicted RBP22.98■■□□□ 1.27
CLN6-207ENST00000566347 ITGB3BPQ13352 177 aaPredicted RBP22.98■■□□□ 1.27
CLN6-207ENST00000566347 JAKMIP3Q5VZ66 844 aa22.98■■□□□ 1.27
CLN6-207ENST00000566347 PLPPR4Q7Z2D5 763 aa22.98■■□□□ 1.27
CLN6-207ENST00000566347 PCYT2Q99447 389 aa22.98■■□□□ 1.27
CLN6-207ENST00000566347 LMCD1Q9NZU5 365 aa22.98■■□□□ 1.27
CLN6-207ENST00000566347 SPTBN5Q9NRC6 3674 aaKnown RBP22.98■■□□□ 1.27
CLN6-207ENST00000566347 REV3LO60673 3130 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 COL4A4P53420 1690 aaPredicted RBP22.97■■□□□ 1.27
CLN6-207ENST00000566347 CHRNA1P02708 482 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 CYP3A4P08684 503 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 INSRRP14616 1297 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 GNA11P29992 359 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 SLC26A2P50443 739 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 STAT5BP51692 787 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 EVCP57679 992 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 SKIV2LQ15477 1246 aaKnown RBP22.97■■□□□ 1.27
CLN6-207ENST00000566347 PKN1Q16512 942 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 MARCH8Q5T0T0 291 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 SPRED2Q7Z698 418 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 REXO1Q8N1G1 1221 aaKnown RBP22.97■■□□□ 1.27
CLN6-207ENST00000566347 RNF26Q9BY78 433 aaPredicted RBP22.97■■□□□ 1.27
CLN6-207ENST00000566347 TRPC6Q9Y210 931 aa22.97■■□□□ 1.27
CLN6-207ENST00000566347 SIP14410 1827 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 LPXNO60711 386 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 ATG7O95352 703 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 IGBP1P78318 339 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 MGAT3Q09327 533 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 RUFY3Q7L099 469 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 PLA2G4DQ86XP0 818 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 IL27Q8NEV9 243 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 CCDC148Q8NFR7 591 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 BICD2Q8TD16 824 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 SP7Q8TDD2 431 aaPredicted RBP22.96■■□□□ 1.27
CLN6-207ENST00000566347 DNAJB3Q8WWF6 145 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 CRYGNQ8WXF5 182 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 PHKBQ93100 1093 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 TOP1MTQ969P6 601 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 OSBPL7Q9BZF2 842 aa22.96■■□□□ 1.27
CLN6-207ENST00000566347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.95■■□□□ 1.26
CLN6-207ENST00000566347 FAM86B1E9PN63 330 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 FAM86B2P0C5J1 330 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 IFNAR1P17181 557 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 SETQ01105 290 aaPredicted RBP22.95■■□□□ 1.26
CLN6-207ENST00000566347 PLCB4Q15147 1175 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 NTRK3Q16288 839 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 AAK1Q2M2I8 961 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 GDPD5Q8WTR4 605 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 YME1L1Q96TA2 773 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 MTUS1Q9ULD2 1270 aa22.95■■□□□ 1.26
CLN6-207ENST00000566347 GHRP10912 638 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 PDIA3P30101 505 aaKnown RBP22.94■■□□□ 1.26
CLN6-207ENST00000566347 IER5Q5VY09 327 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 FAM160B1Q5W0V3 765 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 KRT40Q6A162 431 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 SLC26A6Q9BXS9 759 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 SUGCTQ9HAC7 445 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 ZSWIM6Q9HCJ5 1215 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 CYP46A1Q9Y6A2 500 aa22.94■■□□□ 1.26
CLN6-207ENST00000566347 IGLV3-22A0A075B6J6 115 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 IGKV6D-21A0A0A0MT36 114 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 POTEB3A0JP26 581 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 RBAK-RBAKDNI3L0D1 243 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 DDX39AO00148 427 aaKnown RBP22.93■■□□□ 1.26
CLN6-207ENST00000566347 IPO5O00410 1097 aaKnown RBP22.93■■□□□ 1.26
CLN6-207ENST00000566347 MRPS6P82932 125 aaKnown RBP22.93■■□□□ 1.26
CLN6-207ENST00000566347 LPIN1Q14693 890 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 POTEBQ6S5H4 581 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 ABHD15Q6UXT9 468 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 SAMD11Q96NU1 681 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 TBC1D22BQ9NU19 505 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 COG5Q9UP83 839 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 PCDHA2Q9Y5H9 948 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 CDY2AQ9Y6F7 541 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 COL4A6Q14031 1691 aa22.93■■□□□ 1.26
CLN6-207ENST00000566347 M0QZ92 97 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 BACH1O14867 736 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 UPP2O95045 317 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 CCNE2O96020 404 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 FBXO47Q5MNV8 452 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 TSHZ1Q6ZSZ6 1077 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 FBXO22Q8NEZ5 403 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 ZNF577Q9BSK1 485 aa22.92■■□□□ 1.26
CLN6-207ENST00000566347 TM6SF1Q9BZW5 370 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms