RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 AGO4Q9HCK5 861 aaKnown RBP27.14■■□□□ 1.94
RAB40C-209ENST00000565511 SLC9A2Q9UBY0 812 aa27.14■■□□□ 1.94
RAB40C-209ENST00000565511 TUBE1Q9UJT0 475 aa27.14■■□□□ 1.94
RAB40C-209ENST00000565511 COL4A6Q14031 1691 aa27.14■■□□□ 1.93
RAB40C-209ENST00000565511 PPFIA3O75145 1194 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 GHRP10912 638 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 SREBF1P36956 1147 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 METAP2P50579 478 aaKnown RBP eCLIP27.13■■□□□ 1.93
RAB40C-209ENST00000565511 RCAN1P53805 252 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 IGBP1P78318 339 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 JAKMIP3Q5VZ66 844 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 TRAPPC12Q8WVT3 735 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 UIMC1Q96RL1 719 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 SMARCAD1Q9H4L7 1026 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 NFASCO94856 1347 aa27.13■■□□□ 1.93
RAB40C-209ENST00000565511 hCG_1984214I3L0E3 225 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 MAFGO15525 162 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 BMP1P13497 986 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 ACTR2P61160 394 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 LPIN1Q14693 890 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 PKN1Q16512 942 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 PFKFB3Q16875 520 aaPredicted RBP27.12■■□□□ 1.93
RAB40C-209ENST00000565511 CEP55Q53EZ4 464 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 RPAINQ86UA6 219 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 ZNF713Q8N859 430 aaPredicted RBP27.12■■□□□ 1.93
RAB40C-209ENST00000565511 DNAJB3Q8WWF6 145 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 IFIH1Q9BYX4 1025 aaKnown RBP27.12■■□□□ 1.93
RAB40C-209ENST00000565511 INSL6Q9Y581 213 aa27.12■■□□□ 1.93
RAB40C-209ENST00000565511 TNFRSF10AO00220 468 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 MEIS1O00470 390 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 UPP2O95045 317 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 CCNE2O96020 404 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 FOSP01100 380 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-209ENST00000565511 HMGB1P09429 215 aaKnown RBP27.11■■□□□ 1.93
RAB40C-209ENST00000565511 INSRRP14616 1297 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 PLCB4Q15147 1175 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 CRYGNQ8WXF5 182 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 TOP1MTQ969P6 601 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 CCDC136Q96JN2 1154 aa27.11■■□□□ 1.93
RAB40C-209ENST00000565511 FAM86B1E9PN63 330 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 FAM86B2P0C5J1 330 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 SCG2P13521 617 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 RPS6KB1P23443 525 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 AP3B2Q13367 1082 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 TAF2Q6P1X5 1199 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 UHRF1Q96T88 793 aaPredicted RBP27.1■■□□□ 1.93
RAB40C-209ENST00000565511 AGXT2Q9BYV1 514 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 CDY2AQ9Y6F7 541 aa27.1■■□□□ 1.93
RAB40C-209ENST00000565511 RALGAPA2Q2PPJ7 1873 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 DDX39AO00148 427 aaKnown RBP27.09■■□□□ 1.93
RAB40C-209ENST00000565511 FGD1P98174 961 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 BLOC1S2Q6QNY1 142 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 LINC01599Q8WXQ3 324 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 PHKBQ93100 1093 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 SDF4Q9BRK5 362 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 FAM49AQ9H0Q0 323 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-209ENST00000565511 TSPYL2Q9H2G4 693 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-209ENST00000565511 MYO7AQ13402 2215 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 TTC3P53804 2025 aa27.09■■□□□ 1.93
RAB40C-209ENST00000565511 WDR81Q562E7 1941 aa27.08■■□□□ 1.93
RAB40C-209ENST00000565511 IGLV3-22A0A075B6J6 115 aa27.08■■□□□ 1.93
RAB40C-209ENST00000565511 NTRK3Q16288 839 aa27.08■■□□□ 1.93
RAB40C-209ENST00000565511 FBXO47Q5MNV8 452 aa27.08■■□□□ 1.93
RAB40C-209ENST00000565511 FBXO22Q8NEZ5 403 aa27.08■■□□□ 1.93
RAB40C-209ENST00000565511 APBB2Q92870 758 aa27.08■■□□□ 1.93
RAB40C-209ENST00000565511 AGO3Q9H9G7 860 aaKnown RBP27.08■■□□□ 1.93
RAB40C-209ENST00000565511 DHX15O43143 795 aaKnown RBP27.07■■□□□ 1.92
RAB40C-209ENST00000565511 ATG7O95352 703 aa27.07■■□□□ 1.92
RAB40C-209ENST00000565511 MRPS6P82932 125 aaKnown RBP27.07■■□□□ 1.92
RAB40C-209ENST00000565511 TEX2Q8IWB9 1127 aa27.07■■□□□ 1.92
RAB40C-209ENST00000565511 RASGRP4Q8TDF6 673 aa27.07■■□□□ 1.92
RAB40C-209ENST00000565511 YME1L1Q96TA2 773 aa27.07■■□□□ 1.92
RAB40C-209ENST00000565511 TRPC6Q9Y210 931 aa27.07■■□□□ 1.92
RAB40C-209ENST00000565511 ESYT2A0FGR8 921 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 TMEM62Q0P6H9 643 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 EPC2Q52LR7 807 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 ZMYND12Q9H0C1 365 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 AZI2Q9H6S1 392 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 NCOA5Q9HCD5 579 aaKnown RBP27.06■■□□□ 1.92
RAB40C-209ENST00000565511 LMCD1Q9NZU5 365 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 KIAA1671Q9BY89 1806 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 EVPLQ92817 2033 aa27.06■■□□□ 1.92
RAB40C-209ENST00000565511 IGKV6D-21A0A0A0MT36 114 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 PRPF3O43395 683 aaKnown RBP27.05■■□□□ 1.92
RAB40C-209ENST00000565511 EDIL3O43854 480 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 LINC00271P0C7V0 271 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 STAT5BP51692 787 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 ABHD15Q6UXT9 468 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 NIPA1Q7RTP0 329 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 PLPPR4Q7Z2D5 763 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 PLA2G4DQ86XP0 818 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 CCDC60Q8IWA6 550 aaPredicted RBP27.05■■□□□ 1.92
RAB40C-209ENST00000565511 FBXL16Q8N461 479 aa27.05■■□□□ 1.92
RAB40C-209ENST00000565511 RC3H2Q9HBD1 1191 aaKnown RBP27.05■■□□□ 1.92
RAB40C-209ENST00000565511 RRN3P2A6NIE6 340 aa27.04■■□□□ 1.92
RAB40C-209ENST00000565511 CYP3A4P08684 503 aa27.04■■□□□ 1.92
RAB40C-209ENST00000565511 CD52P31358 61 aa27.04■■□□□ 1.92
RAB40C-209ENST00000565511 ZNF76P36508 570 aa27.04■■□□□ 1.92
RAB40C-209ENST00000565511 GLT8D2Q9H1C3 349 aa27.04■■□□□ 1.92
RAB40C-209ENST00000565511 COG5Q9UP83 839 aa27.04■■□□□ 1.92
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