RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 RTN4RL1Q86UN2 441 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-213ENST00000565173 NEK9Q8TD19 979 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 GLG1Q92896 1179 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 IL17RAQ96F46 866 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 MXRA8Q9BRK3 442 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 C1QTNF1Q9BXJ1 281 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 AGO3Q9H9G7 860 aaKnown RBP9.83□□□□□ -0.84
CAPN3-213ENST00000565173 RIC8AQ9NPQ8 531 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 TUBE1Q9UJT0 475 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 WDFY4Q6ZS81 3184 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 C5orf67F2Z3F1 127 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 STXBP3O00186 592 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 MEIS1O00470 390 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 ATG7O95352 703 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 KCNA5P22460 613 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 CDC27P30260 824 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 CLK2P49760 499 aaKnown RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 ACTR2P61160 394 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 ITGB3BPQ13352 177 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 GPM6BQ13491 265 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 PTPROQ16827 1216 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 CEP55Q53EZ4 464 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 DHX32Q7L7V1 743 aaKnown RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 PLPPR4Q7Z2D5 763 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 TEX2Q8IWB9 1127 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 FIBCD1Q8N539 461 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 BANK1Q8NDB2 785 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 LINC01599Q8WXQ3 324 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 CLP1Q92989 425 aaKnown RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 ZNF689Q96CS4 500 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 TCEANC2Q96MN5 208 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 AGO4Q9HCK5 861 aaKnown RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 RBM28Q9NW13 759 aaKnown RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 SLC9A2Q9UBY0 812 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 CDY2AQ9Y6F7 541 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 V9GY48 417 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-213ENST00000565173 KAT6AQ92794 2004 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 NFASCO94856 1347 aa9.82□□□□□ -0.84
CAPN3-213ENST00000565173 IGKV6D-21A0A0A0MT36 114 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 SMCO2A6NFE2 343 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 GRXCR2A6NFK2 248 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 RRN3P2A6NIE6 340 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 PI4K2BG5E9Z4 385 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 ADAMTS3O15072 1205 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 ZBTB43O43298 467 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 DGKIO75912 1065 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-213ENST00000565173 RB1P06400 928 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 CD52P31358 61 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 BMPR1AP36894 532 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 NAPAP54920 295 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 IGBP1P78318 339 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 MRPS6P82932 125 aaKnown RBP9.81□□□□□ -0.84
CAPN3-213ENST00000565173 PLCB4Q15147 1175 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 RTN1Q16799 776 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 TCEAL5Q5H9L2 206 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 SYNE3Q6ZMZ3 975 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 TSHZ1Q6ZSZ6 1077 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 RSPH3Q86UC2 560 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 FAM178BQ8IXR5 827 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 TRAPPC12Q8WVT3 735 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 CRYGNQ8WXF5 182 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 TMEM260Q9NX78 707 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 BARHL2Q9NY43 387 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 SQORQ9Y6N5 450 aa9.81□□□□□ -0.84
CAPN3-213ENST00000565173 H3BQ06 376 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 GRM6O15303 877 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 DHX15O43143 795 aaKnown RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 CCNE2O96020 404 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 RPLP2P05387 115 aaKnown RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 IL9P15248 144 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 LTBRP36941 435 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 SREBF1P36956 1147 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 STAT5BP51692 787 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 CAMK1Q14012 370 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 CTC1Q2NKJ3 1217 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 TIGD5Q53EQ6 642 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 IER5Q5VY09 327 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 ABHD15Q6UXT9 468 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 NIPA1Q7RTP0 329 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 KCNB2Q92953 911 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 PABPC5Q96DU9 382 aaKnown RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 ANO3Q9BYT9 981 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 FAM49AQ9H0Q0 323 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 TMX1Q9H3N1 280 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 NSUN3Q9H649 340 aaKnown RBP9.8□□□□□ -0.84
CAPN3-213ENST00000565173 AZI2Q9H6S1 392 aa9.8□□□□□ -0.84
CAPN3-213ENST00000565173 PADI3Q9ULW8 664 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms