RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ZKSCAN1P17029 563 aaPredicted RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TCP1P17987 556 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 CD9P21926 228 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 GNL1P36915 607 aaPredicted RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 PIP4K2AP48426 406 aaPredicted RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ALDH5A1P51649 535 aaPredicted RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 THOP1P52888 689 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 KRT83P78385 493 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 XIAPP98170 497 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 GUCY1A3Q02108 690 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 KIF23Q02241 960 aaPredicted RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 EXOSC9Q06265 439 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 WASHC5Q12768 1159 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TBL3Q12788 808 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 BNIP1Q12981 228 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 DIXDC1Q155Q3 683 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF423Q2M1K9 1284 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 P3H1Q32P28 736 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 PHLDB3Q6NSJ2 640 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 KANK3Q6NY19 840 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 BORAQ6PGQ7 559 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 LVRNQ6Q4G3 990 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TOGARAM2Q6ZUX3 1019 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ASRGL1Q7L266 308 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 SLC35F6Q8N357 371 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 GOLM1Q8NBJ4 401 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 UHMK1Q8TAS1 419 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 PIGOQ8TEQ8 1089 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 NAT14Q8WUY8 206 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 STARD8Q92502 1023 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 EME1Q96AY2 570 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 GRAMD1AQ96CP6 724 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 COG3Q96JB2 828 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 PBKQ96KB5 322 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 C8orf48Q96LL4 319 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 USP28Q96RU2 1077 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 AIFM2Q9BRQ8 373 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 UQCC2Q9BRT2 126 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 EHD4Q9H223 541 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 C19orf44Q9H6X5 657 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ZSWIM4Q9H7M6 989 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ZSWIM6Q9HCJ5 1215 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 METTL5Q9NRN9 209 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 INIPQ9NRY2 104 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 GID8Q9NWU2 228 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 DCAF16Q9NXF7 216 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 PLK2Q9NYY3 685 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 CHPF2Q9P2E5 772 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 DNAJB4Q9UDY4 337 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TUBE1Q9UJT0 475 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF180Q9UJW8 692 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 AGAP1Q9UPQ3 857 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 NFE2L3Q9Y4A8 694 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TIMM22Q9Y584 194 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 KIAA1210Q9ULL0 1709 aa6.81□□□□□ -1.32
PTPN9-204ENST00000564970 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
PTPN9-204ENST00000564970 TUBGCP6Q96RT7 1819 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 PASKQ96RG2 1323 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 MACROD2A1Z1Q3 448 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 FADS2P1A8MWK0 482 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ERVV-2B6SEH9 535 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 HIP1O00291 1037 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 SLC22A1O15245 554 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 SLC26A4O43511 780 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 NDUFB5O43674 189 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 KRT86O43790 486 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 FARP2O94887 1054 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 YEATS4O95619 227 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ESRRBO95718 433 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 GSTT2P0CG29 244 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 GSTT2BP0CG30 244 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TPBGLP0DKB5 382 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 UBL4AP11441 157 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 HOXB1P14653 301 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 NFKBIAP25963 317 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TKTP29401 623 aaKnown RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ATP5DP30049 168 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 PPARGP37231 505 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 RAD23BP54727 409 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 NCALDP61601 193 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 MECOMQ03112 1051 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 RIPPLY1Q0D2K3 151 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 RESTQ13127 1097 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 CUL1Q13616 776 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 MAPRE2Q15555 327 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ERMARDQ5T6L9 678 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 RNF220Q5VTB9 566 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TRIM68Q6AZZ1 485 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TMTC3Q6ZXV5 915 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 CYP2U1Q7Z449 544 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TBC1D1Q86TI0 1168 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 SPATA24Q86W54 205 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 SFR1Q86XK3 245 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms