RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 EVI5O60447 810 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 SCP2P22307 547 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 KLRC1P26715 233 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 CCDC127Q96BQ5 260 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-209ENST00000564068 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
COMMD4-209ENST00000564068 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 OPHN1O60890 802 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 MYBL2P10244 700 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 KCNB1Q14721 858 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 TMED2Q15363 201 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 ARHGAP24Q8N264 748 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 RILPQ96NA2 401 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 PITPNM3Q9BZ71 974 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 AGTPBP1Q9UPW5 1226 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 DESP17661 470 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 PMS2P54278 862 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 ADCY2Q08462 1091 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 NTRK3Q16288 839 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 UBE2SQ16763 222 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 ARHGEF18Q6ZSZ5 1173 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 APBB1IPQ7Z5R6 666 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-209ENST00000564068 FAM178BQ8IXR5 827 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 CCHCR1Q8TD31 782 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 SHPRHQ149N8 1683 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
COMMD4-209ENST00000564068 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 KIF2BQ8N4N8 673 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 PDE2AO00408 941 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SKAP2O75563 359 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 CFBP00751 764 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 GLI1P08151 1106 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SARSP49591 514 aaKnown RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SGO2Q562F6 1265 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 TMEM139Q8IV31 216 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 ELOA2Q8IYF1 753 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 FAM186BQ8IYM0 893 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 ECT2Q9H8V3 914 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 ECEL1O95672 775 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 PDHBP11177 359 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SLC16A2P36021 539 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 DRP2Q13474 957 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SLMAPQ14BN4 828 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SRRM1Q8IYB3 904 aaKnown RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 DNAJC7Q99615 494 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 LOC102724428A0A0B4J2F2 783 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 GRID2IPA4D2P6 1211 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SFI1A8K8P3 1242 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 CHN1P15882 459 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 ATF7P17544 494 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SIK1P57059 783 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 TBC1D10BQ4KMP7 808 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 KAZNQ674X7 775 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 CELF4Q9BZC1 486 aaKnown RBP13.66□□□□□ -0.22
COMMD4-209ENST00000564068 ZNF148Q9UQR1 794 aa13.66□□□□□ -0.22
COMMD4-209ENST00000564068 UFL1O94874 794 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 SMTNP53814 917 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 NSMCE1Q8WV22 266 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 PRMT1Q99873 361 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 IMPG2Q9BZV3 1241 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 PLAGL2Q9UPG8 496 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 PDS5AQ29RF7 1337 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 A0A087X0B3 334 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 ANKRD35Q8N283 1001 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 CASKIN2Q8WXE0 1202 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 MAP2P11137 1827 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 HSD17B3P37058 310 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 MSH2P43246 934 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 MECOMQ03112 1051 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 TSEN2Q8NCE0 465 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
COMMD4-209ENST00000564068 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.22
COMMD4-209ENST00000564068 PPLO60437 1756 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms