RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 MTRQ99707 1265 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ASCC2Q9H1I8 757 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 RNPEPL1Q9HAU8 725 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ZNF212Q9UDV6 495 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TMEM110-MUSTN1A8MSY1 372 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TCP11X1B4DZS4 312 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SMAPO00193 183 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ASNA1O43681 348 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 FCHO2Q0JRZ9 810 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TRMT10CQ7L0Y3 403 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 RIBC1Q8N443 379 aaPredicted RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 PLEKHG4BQ96PX9 1271 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 BLOC1S6Q9UL45 172 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TNFAIP8O95379 198 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 RESP18Q5W5W9 173 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 REXO1L1PQ8IX06 675 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CCDC82Q8N4S0 544 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 EIF1ADQ8N9N8 165 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZBTB8BQ8NAP8 495 aaPredicted RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZIM3Q96PE6 472 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 RANBP17Q9H2T7 1088 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 IDH1O75874 414 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 FMNL1O95466 1100 aaPredicted RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 SERPING1P05155 500 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 H2AFZP0C0S5 128 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SLC5A9Q2M3M2 681 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TCP11X2Q5H9J9 407 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 KRT79Q5XKE5 535 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 H2AFVQ71UI9 128 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 GPR141Q7Z602 305 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CRLF3Q8IUI8 442 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 FMR1NBQ8N0W7 255 aaPredicted RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 OMA1Q96E52 524 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 IFT122Q9HBG6 1241 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ANGPTL3Q9Y5C1 460 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ATP9AO75110 1047 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 FKBP6O75344 327 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ALOX5P09917 674 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CSB-PGBD3P0DP91 1061 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TTKP33981 857 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 FNTAP49354 379 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SF3A3Q12874 501 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZBTB41Q5SVQ8 909 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZMYM1Q5SVZ6 1142 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CNKSR1Q969H4 720 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CNBD2Q96M20 576 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 AZI2Q9H6S1 392 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 STMN3Q9NZ72 180 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 MAN1B1Q9UKM7 699 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TRIM33Q9UPN9 1127 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 MIF4GDA9UHW6 222 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 MYBPC2Q14324 1141 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 PDCD4Q53EL6 469 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZNF658Q5TYW1 1059 aaPredicted RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 GSPT2Q8IYD1 628 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZNF579Q8NAF0 562 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 CYP39A1Q9NYL5 469 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ZMYM6O95789 1325 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 IQANK1A0A1B0GTG1 560 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 C16orf96A6NNT2 1141 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SMNDC1O75940 238 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLK3-212ENST00000563418 KLHL4Q9C0H6 718 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 HDAC6Q9UBN7 1215 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 COQ9O75208 318 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ADCY1Q08828 1119 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TMED2Q15363 201 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLK3-212ENST00000563418 SH2D3CQ8N5H7 860 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SEPT8Q92599 483 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 JADE3Q92613 823 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 RPS6KC1Q96S38 1066 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ISCUQ9H1K1 167 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 COPG1Q9Y678 874 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 GOLGA8RI6L899 631 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TRAPPC3O43617 180 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ACTN1P12814 892 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CA4P22748 312 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 ANXA13P27216 316 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SLC34A1Q06495 639 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 KIRREL3Q8IZU9 778 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 CNBD1Q8NA66 436 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 LTV1Q96GA3 475 aaPredicted RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 MMS19Q96T76 1030 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 TBCCD1Q9NVR7 557 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 FBXL5Q9UKA1 691 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 MTO1Q9Y2Z2 717 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 MAST1Q9Y2H9 1570 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 RASA4BC9J798 803 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 RASA4O43374 803 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SYF2O95926 243 aaKnown RBP6.72□□□□□ -1.33
CLK3-212ENST00000563418 RFC5P40937 340 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 SEC24CP53992 1094 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 XIAPP98170 497 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 BRD8Q9H0E9 1235 aa6.72□□□□□ -1.33
CLK3-212ENST00000563418 HMGXB3Q12766 1538 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 DUOX2Q9NRD8 1548 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms