RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 SLC9A2Q9UBY0 812 aa23.98■■□□□ 1.43
CHD9-208ENST00000563410 ZBTB43O43298 467 aa23.97■■□□□ 1.43
CHD9-208ENST00000563410 RTN1Q16799 776 aa23.97■■□□□ 1.43
CHD9-208ENST00000563410 PPP1R18Q6NYC8 613 aa23.97■■□□□ 1.43
CHD9-208ENST00000563410 CENPQQ7L2Z9 268 aaPredicted RBP23.97■■□□□ 1.43
CHD9-208ENST00000563410 TMEM192Q8IY95 271 aa23.97■■□□□ 1.43
CHD9-208ENST00000563410 ZBTB10Q96DT7 871 aa23.97■■□□□ 1.43
CHD9-208ENST00000563410 MRPL38Q96DV4 380 aaKnown RBP23.97■■□□□ 1.43
CHD9-208ENST00000563410 V9GY48 417 aaPredicted RBP23.97■■□□□ 1.43
CHD9-208ENST00000563410 EVPLQ92817 2033 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 NFASCO94856 1347 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 H3BNC9 293 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 STXBP3O00186 592 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 ARP10275 920 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 INSRRP14616 1297 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 CDC27P30260 824 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 FBXO47Q5MNV8 452 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 RSPH3Q86UC2 560 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 TEX2Q8IWB9 1127 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 CDY2AQ9Y6F7 541 aa23.96■■□□□ 1.43
CHD9-208ENST00000563410 FOSP01100 380 aaPredicted RBP23.95■■□□□ 1.42
CHD9-208ENST00000563410 CLK2P49760 499 aaKnown RBP23.95■■□□□ 1.42
CHD9-208ENST00000563410 IGBP1P78318 339 aa23.95■■□□□ 1.42
CHD9-208ENST00000563410 ITGB3BPQ13352 177 aaPredicted RBP23.95■■□□□ 1.42
CHD9-208ENST00000563410 GPM6BQ13491 265 aa23.95■■□□□ 1.42
CHD9-208ENST00000563410 ANO3Q9BYT9 981 aa23.95■■□□□ 1.42
CHD9-208ENST00000563410 RC3H2Q9HBD1 1191 aaKnown RBP23.95■■□□□ 1.42
CHD9-208ENST00000563410 BARHL2Q9NY43 387 aa23.95■■□□□ 1.42
CHD9-208ENST00000563410 RAPGEFL1Q9UHV5 662 aa23.95■■□□□ 1.42
CHD9-208ENST00000563410 KIAA1671Q9BY89 1806 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 KLF18A0A0U1RQI7 1052 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 SMCO2A6NFE2 343 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 RRN3P2A6NIE6 340 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 GOLGA8AA7E2F4 631 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 GOLGA8BA8MQT2 603 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 hCG_1984214I3L0E3 225 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 ENPP3O14638 875 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 LINC00271P0C7V0 271 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 ADCY7P51828 1080 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 ACTR2P61160 394 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 CEP55Q53EZ4 464 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 ZNF713Q8N859 430 aaPredicted RBP23.94■■□□□ 1.42
CHD9-208ENST00000563410 IL17RAQ96F46 866 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 TMEM260Q9NX78 707 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 MYH9P35579 1960 aaKnown RBP23.94■■□□□ 1.42
CHD9-208ENST00000563410 WDR81Q562E7 1941 aa23.94■■□□□ 1.42
CHD9-208ENST00000563410 SREBF1P36956 1147 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 MRPS6P82932 125 aaKnown RBP23.93■■□□□ 1.42
CHD9-208ENST00000563410 PLCB4Q15147 1175 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 PTPROQ16827 1216 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 TSHZ1Q6ZSZ6 1077 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 PLPPR4Q7Z2D5 763 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 SDF4Q9BRK5 362 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 AZI2Q9H6S1 392 aa23.93■■□□□ 1.42
CHD9-208ENST00000563410 AGO3Q9H9G7 860 aaKnown RBP23.93■■□□□ 1.42
CHD9-208ENST00000563410 AGO4Q9HCK5 861 aaKnown RBP23.93■■□□□ 1.42
CHD9-208ENST00000563410 MEIS1O00470 390 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 CDC45O75419 566 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 ATG7O95352 703 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 RCAN1P53805 252 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 AP3B2Q13367 1082 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 KRT32Q14532 448 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 LEXMQ3ZCV2 418 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 FIBCD1Q8N539 461 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.92■■□□□ 1.42
CHD9-208ENST00000563410 TRAPPC12Q8WVT3 735 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 LINC01599Q8WXQ3 324 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 FAM49AQ9H0Q0 323 aaPredicted RBP23.92■■□□□ 1.42
CHD9-208ENST00000563410 TRPC6Q9Y210 931 aa23.92■■□□□ 1.42
CHD9-208ENST00000563410 KCNA5P22460 613 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 CD52P31358 61 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 STAT5BP51692 787 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 TIGD5Q53EQ6 642 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 KHSRPQ92945 711 aaKnown RBP eCLIP23.91■■□□□ 1.426e-10■■■■■ 35.2
CHD9-208ENST00000563410 ZNF689Q96CS4 500 aaPredicted RBP23.91■■□□□ 1.42
CHD9-208ENST00000563410 C1QTNF1Q9BXJ1 281 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 EPHX3Q9H6B9 360 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 CD320Q9NPF0 282 aa23.91■■□□□ 1.42
CHD9-208ENST00000563410 ADGRA3Q8IWK6 1321 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 IGKV6D-21A0A0A0MT36 114 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 C5orf67F2Z3F1 127 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 RPLP2P05387 115 aaKnown RBP23.9■■□□□ 1.42
CHD9-208ENST00000563410 CPA1P15085 419 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 ADD1P35611 737 aaKnown RBP23.9■■□□□ 1.42
CHD9-208ENST00000563410 RTN4RL1Q86UN2 441 aaPredicted RBP23.9■■□□□ 1.42
CHD9-208ENST00000563410 BANK1Q8NDB2 785 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 KCNB2Q92953 911 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 GLT8D2Q9H1C3 349 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 PCDHA2Q9Y5H9 948 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 SQORQ9Y6N5 450 aa23.9■■□□□ 1.42
CHD9-208ENST00000563410 ADAMTS3O15072 1205 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 CCNE2O96020 404 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 HMGB1P09429 215 aaKnown RBP23.89■■□□□ 1.41
CHD9-208ENST00000563410 CTNNB1P35222 781 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 TMEM62Q0P6H9 643 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 TCEAL5Q5H9L2 206 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 IER5Q5VY09 327 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 NIPA1Q7RTP0 329 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 CRIPAKQ8N1N5 446 aa23.89■■□□□ 1.41
CHD9-208ENST00000563410 NEK9Q8TD19 979 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms