RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 AMHP03971 560 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 RPLP2P05387 115 aaKnown RBP19.15■□□□□ 0.66
CLK3-210ENST00000563112 FAM86B2P0C5J1 330 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 NLRP5P59047 1200 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 IGBP1P78318 339 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 DEFB103AP81534 67 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 SETQ01105 290 aaPredicted RBP19.15■□□□□ 0.66
CLK3-210ENST00000563112 PLEKHG4Q58EX7 1191 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 FAM26DQ5JW98 314 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 RPAINQ86UA6 219 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 CRYGNQ8WXF5 182 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 PCYT2Q99447 389 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 TBC1D22BQ9NU19 505 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 TCEAL9Q9UHQ7 104 aa19.15■□□□□ 0.66
CLK3-210ENST00000563112 DDX39AO00148 427 aaKnown RBP19.14■□□□□ 0.65
CLK3-210ENST00000563112 BACH1O14867 736 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 INSRRP14616 1297 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 SLC26A2P50443 739 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 STK3Q13188 491 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 TCTN1Q2MV58 587 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 FAM160B1Q5W0V3 765 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 PPM1EQ8WY54 764 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 RAD9AQ99638 391 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 LARP6Q9BRS8 491 aaKnown RBP19.14■□□□□ 0.65
CLK3-210ENST00000563112 ZNF577Q9BSK1 485 aa19.14■□□□□ 0.65
CLK3-210ENST00000563112 IGLV3-22A0A075B6J6 115 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 IPO5O00410 1097 aaKnown RBP19.13■□□□□ 0.65
CLK3-210ENST00000563112 ATG7O95352 703 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 GJB5O95377 273 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 ANAPC15P60006 121 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 ADGRE1Q14246 886 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 PLCB4Q15147 1175 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 MIS18BP1Q6P0N0 1132 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 RUFY4Q6ZNE9 571 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 RASGRP4Q8TDF6 673 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 APBB2Q92870 758 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 C22orf23Q9BZE7 217 aa19.13■□□□□ 0.65
CLK3-210ENST00000563112 POTEB3A0JP26 581 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 MBLAC1A4D2B0 266 aaPredicted RBP19.12■□□□□ 0.65
CLK3-210ENST00000563112 ADAMTS3O15072 1205 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 GTPBP6O43824 516 aaPredicted RBP19.12■□□□□ 0.65
CLK3-210ENST00000563112 CDKL5O76039 1030 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 CIITAP33076 1130 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 TAP1Q03518 808 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 PRR16Q569H4 304 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 FAM117BQ6P1L5 589 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 POTEBQ6S5H4 581 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 ABHD15Q6UXT9 468 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 TMCO2Q7Z6W1 182 aaPredicted RBP19.12■□□□□ 0.65
CLK3-210ENST00000563112 MYOCDQ8IZQ8 938 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 FAM177A1Q8N128 213 aaPredicted RBP19.12■□□□□ 0.65
CLK3-210ENST00000563112 DNAJB3Q8WWF6 145 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 ARNTL2Q8WYA1 636 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 SLKQ9H2G2 1235 aaPredicted RBP19.12■□□□□ 0.65
CLK3-210ENST00000563112 CERS4Q9HA82 394 aa19.12■□□□□ 0.65
CLK3-210ENST00000563112 CDH23Q9H251 3354 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 DHX15O43143 795 aaKnown RBP19.11■□□□□ 0.65
CLK3-210ENST00000563112 CCNE2O96020 404 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 CHRNA1P02708 482 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 USP11P51784 963 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 ANKRD1Q15327 319 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 MARCH8Q5T0T0 291 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLK3-210ENST00000563112 IFIH1Q9BYX4 1025 aaKnown RBP19.11■□□□□ 0.65
CLK3-210ENST00000563112 ZNF302Q9NR11 478 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 PCDHA4Q9UN74 947 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 INSL6Q9Y581 213 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 PTPRSQ13332 1948 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 CHD7Q9P2D1 2997 aa19.11■□□□□ 0.65
CLK3-210ENST00000563112 IGKV6D-21A0A0A0MT36 114 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 M0QZ92 97 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 HBP1O60381 514 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 KRT76Q01546 638 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 CCDC85BQ15834 202 aaPredicted RBP19.1■□□□□ 0.65
CLK3-210ENST00000563112 IER5Q5VY09 327 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 GALNT17Q6IS24 598 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 ZNF746Q6NUN9 644 aaPredicted RBP19.1■□□□□ 0.65
CLK3-210ENST00000563112 PDXDC2PQ6P474 469 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 SMAP1Q8IYB5 467 aaPredicted RBP19.1■□□□□ 0.65
CLK3-210ENST00000563112 USP38Q8NB14 1042 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 FAM49AQ9H0Q0 323 aaPredicted RBP19.1■□□□□ 0.65
CLK3-210ENST00000563112 PCDHA2Q9Y5H9 948 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 TRANK1O15050 2925 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 MICAL3Q7RTP6 2002 aa19.1■□□□□ 0.65
CLK3-210ENST00000563112 LCHNA4D1U4 455 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 PSAPP07602 524 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 GHRP10912 638 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 MRPS6P82932 125 aaKnown RBP19.09■□□□□ 0.65
CLK3-210ENST00000563112 SWSAP1Q6NVH7 229 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 BLIDQ8IZY5 108 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 TSPYL2Q9H2G4 693 aaPredicted RBP19.09■□□□□ 0.65
CLK3-210ENST00000563112 SAMM50Q9Y512 469 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 CDY2AQ9Y6F7 541 aa19.09■□□□□ 0.65
CLK3-210ENST00000563112 RFXAPO00287 272 aa19.08■□□□□ 0.64
CLK3-210ENST00000563112 ARHGEF15O94989 841 aa19.08■□□□□ 0.64
CLK3-210ENST00000563112 XBP1P17861 261 aa19.08■□□□□ 0.64
CLK3-210ENST00000563112 MGAT3Q09327 533 aa19.08■□□□□ 0.64
CLK3-210ENST00000563112 SCRN1Q12765 414 aa19.08■□□□□ 0.64
CLK3-210ENST00000563112 MKRN4PQ13434 485 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms