RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 SREBF1P36956 1147 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 AKAP17AQ02040 695 aaKnown RBP19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 FAM26DQ5JW98 314 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 CCDC12Q8WUD4 166 aaPredicted RBP19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 DNAJB3Q8WWF6 145 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 APBB2Q92870 758 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 AGO4Q9HCK5 861 aaKnown RBP19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 VCANP13611 3396 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 CHRNA1P02708 482 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 NEFLP07196 543 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 GHRP10912 638 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 CLK2P49760 499 aaKnown RBP19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 ACTR2P61160 394 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 ERVK-21P61565 698 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 MKRN4PQ13434 485 aaPredicted RBP19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 YME1L1Q96TA2 773 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 PCYT2Q99447 389 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 C6orf50Q9HD87 102 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 SIP14410 1827 aa19.13■□□□□ 0.65
TNRC6A-209ENST00000562829 RRN3P2A6NIE6 340 aa19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 PPFIA3O75145 1194 aa19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 INSRRP14616 1297 aa19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 ITGB3BPQ13352 177 aaPredicted RBP19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 PLA2G4DQ86XP0 818 aa19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 TNPO1Q92973 898 aaKnown RBP19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 PHKBQ93100 1093 aa19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 FAM49AQ9H0Q0 323 aaPredicted RBP19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 SUGCTQ9HAC7 445 aa19.12■□□□□ 0.65
TNRC6A-209ENST00000562829 NID2Q14112 1375 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 MBLAC1A4D2B0 266 aaPredicted RBP19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 MEIS1O00470 390 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 LPXNO60711 386 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 STAT5BP51692 787 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 HTRA4P83105 476 aaPredicted RBP19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 TFF2Q03403 129 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 AAK1Q2M2I8 961 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 MARCH8Q5T0T0 291 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 RPAINQ86UA6 219 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 REXO1Q8N1G1 1221 aaKnown RBP19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 FBXO22Q8NEZ5 403 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 TOP1MTQ969P6 601 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 ZBTB10Q96DT7 871 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 C17orf80Q9BSJ5 609 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 CDY2AQ9Y6F7 541 aa19.11■□□□□ 0.65
TNRC6A-209ENST00000562829 ESYT2A0FGR8 921 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 M0QZ92 97 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 BACH1O14867 736 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 PRPF3O43395 683 aaKnown RBP19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 GNA11P29992 359 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 CCT2P78371 535 aaKnown RBP19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 MGAT3Q09327 533 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 PLCB4Q15147 1175 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 NIPA1Q7RTP0 329 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 PLPPR4Q7Z2D5 763 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 TRAPPC12Q8WVT3 735 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 SLC26A6Q9BXS9 759 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 AGXT2Q9BYV1 514 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 ZMYND12Q9H0C1 365 aa19.1■□□□□ 0.65
TNRC6A-209ENST00000562829 POTEB3A0JP26 581 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 FAM86B1E9PN63 330 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 TNFRSF10AO00220 468 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 RPLP2P05387 115 aaKnown RBP19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 FAM86B2P0C5J1 330 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 MRPS6P82932 125 aaKnown RBP19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 LPIN1Q14693 890 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 PKN1Q16512 942 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 FAM160B1Q5W0V3 765 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 MCTP2Q6DN12 878 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 POTEBQ6S5H4 581 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 FBXL16Q8N461 479 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 CCDC148Q8NFR7 591 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 SP7Q8TDD2 431 aaPredicted RBP19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 UHRF1Q96T88 793 aaPredicted RBP19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 RNF26Q9BY78 433 aaPredicted RBP19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 LMCD1Q9NZU5 365 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 TCEAL9Q9UHQ7 104 aa19.09■□□□□ 0.65
TNRC6A-209ENST00000562829 ADAMTS3O15072 1205 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 CCNE2O96020 404 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 CYP3A4P08684 503 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 KCNQ1P51787 676 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 SETQ01105 290 aaPredicted RBP19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 TMEM62Q0P6H9 643 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 FBXO47Q5MNV8 452 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 IER5Q5VY09 327 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 RUFY3Q7L099 469 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 BICD2Q8TD16 824 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 RASGRP4Q8TDF6 673 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 ZNF577Q9BSK1 485 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 NCOA5Q9HCD5 579 aaKnown RBP19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 COG5Q9UP83 839 aa19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 TCF20Q9UGU0 1960 aaKnown RBP19.08■□□□□ 0.64
TNRC6A-209ENST00000562829 TTC28Q96AY4 2481 aa19.07■□□□□ 0.64
TNRC6A-209ENST00000562829 IPO5O00410 1097 aaKnown RBP19.07■□□□□ 0.64
TNRC6A-209ENST00000562829 ATG7O95352 703 aa19.07■□□□□ 0.64
TNRC6A-209ENST00000562829 PDIA3P30101 505 aaKnown RBP19.07■□□□□ 0.64
TNRC6A-209ENST00000562829 SLC26A2P50443 739 aa19.07■□□□□ 0.64
TNRC6A-209ENST00000562829 NTRK3Q16288 839 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms