RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 GRB10Q13322 594 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 ZNF790Q6PG37 636 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 MCM10Q7L590 875 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 MORC1Q86VD1 984 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 GPC2Q8N158 579 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 CELF2-AS1Q8N7Q2 184 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 ST13P5Q8NFI4 369 aaPredicted RBP7.25□□□□□ -1.25
UBR1-203ENST00000562173 MKL1Q969V6 931 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 RCC1LQ96I51 464 aaKnown RBP7.25□□□□□ -1.25
UBR1-203ENST00000562173 SUSD2Q9UGT4 822 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 FZD1Q9UP38 647 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 NIP7Q9Y221 180 aaKnown RBP eCLIP7.25□□□□□ -1.25
UBR1-203ENST00000562173 SF3B6Q9Y3B4 125 aaKnown RBP7.25□□□□□ -1.25
UBR1-203ENST00000562173 NPC1L1Q9UHC9 1359 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 KLRG2A4D1S0 409 aaPredicted RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 B2RBV5 119 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 SUSD5O60279 629 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 GJB6O95452 261 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 ESR1P03372 595 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 ANXA1P04083 346 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 CD8BP10966 210 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 HSPA5P11021 654 aaKnown RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 BMP8BP34820 402 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 IL6STP40189 918 aaPredicted RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 PCBP3P57721 371 aaKnown RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 ZNF445P59923 1031 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 NOL9Q5SY16 702 aaKnown RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 PRAMEF18Q5VWM3 479 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 SLC23A3Q6PIS1 610 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 POMZP3Q6PJE2 187 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 THUMPD2Q9BTF0 503 aaKnown RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 RNF186Q9NXI6 227 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 GPRC5DQ9NZD1 345 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 ZNF451Q9Y4E5 1061 aa7.24□□□□□ -1.25
UBR1-203ENST00000562173 KIAA0100Q14667 2235 aaKnown RBP7.24□□□□□ -1.25
UBR1-203ENST00000562173 PPIP5K2O43314 1243 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 TAL1P17542 331 aaPredicted RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 HUNKP57058 714 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 TBC1D10BQ4KMP7 808 aaPredicted RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 CC2D1BQ5T0F9 858 aaKnown RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 SUSD4Q5VX71 490 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 CWF19L1Q69YN2 538 aaKnown RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 MRM1Q6IN84 353 aaKnown RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 ZNF574Q6ZN55 896 aaPredicted RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 SPRED2Q7Z698 418 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 FIBCD1Q8N539 461 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 TCTN2Q96GX1 697 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 ADGRE2Q9UHX3 823 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
UBR1-203ENST00000562173 LRRC37AA6NMS7 1700 aa7.23□□□□□ -1.25
UBR1-203ENST00000562173 WTIPA6NIX2 430 aaPredicted RBP7.22□□□□□ -1.25
UBR1-203ENST00000562173 TBC1D8O95759 1140 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 ECE1P42892 770 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 ZP2Q05996 745 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 EGR3Q06889 387 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 BNIP3Q12983 259 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 RASGRF1Q13972 1273 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 PNMA8AQ86V59 439 aaPredicted RBP7.22□□□□□ -1.25
UBR1-203ENST00000562173 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 TP53INP2Q8IXH6 220 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 ABI1Q8IZP0 508 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 TTC5Q8N0Z6 440 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 MICAL1Q8TDZ2 1067 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 DNAJC2Q99543 621 aaKnown RBP7.22□□□□□ -1.25
UBR1-203ENST00000562173 APBA2Q99767 749 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 CCDC113Q9H0I3 377 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 FAM86C1Q9NVL1 165 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 CGGBP1Q9UFW8 167 aaPredicted RBP7.22□□□□□ -1.25
UBR1-203ENST00000562173 PCDHA11Q9Y5I1 949 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 PSME4Q14997 1843 aa7.22□□□□□ -1.25
UBR1-203ENST00000562173 AGRPO00253 132 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 ZNF205O95201 554 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 STARD3NLO95772 234 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 HMGB2P26583 209 aaKnown RBP7.21□□□□□ -1.26
UBR1-203ENST00000562173 TEKQ02763 1124 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 PLCL1Q15111 1095 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 PROSER3Q2NL68 480 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 SLC10A6Q3KNW5 377 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 ARHGEF39Q8N4T4 335 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 ZNF513Q8N8E2 541 aaPredicted RBP7.21□□□□□ -1.26
UBR1-203ENST00000562173 ALPK1Q96QP1 1244 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 OSBPL2Q9H1P3 480 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 CARS2Q9HA77 564 aaKnown RBP7.21□□□□□ -1.26
UBR1-203ENST00000562173 TCFL5Q9UL49 500 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 TRIOBPQ9H2D6 2365 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 ABCC4O15439 1325 aa7.21□□□□□ -1.26
UBR1-203ENST00000562173 RTL9Q8NET4 1388 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 RIC1Q4ADV7 1423 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 MYL6BP14649 208 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 MAP2K2P36507 400 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 CD96P40200 585 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 CTSKP43235 329 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 FXR1P51114 621 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBR1-203ENST00000562173 POU4F1Q01851 419 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 RASA3Q14644 834 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 NFE2L2Q16236 605 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 CRY2Q49AN0 593 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms