RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 NLGN1Q8N2Q7 840 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 FLAD1Q8NFF5 587 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 APPBP2Q92624 585 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 NARFQ9UHQ1 456 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 PCDHA11Q9Y5I1 949 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 STXBP3O00186 592 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 PRODHO43272 600 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 MED26O95402 600 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 SNRPB2P08579 225 aaKnown RBP7.57□□□□□ -1.2
LRRC28-220ENST00000561253 CT47B1P0C2W7 299 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-220ENST00000561253 FGFR1P11362 822 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 TM4SF1P30408 202 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 HOXC12P31275 282 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 KCNJ6P48051 423 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 TMEM67Q5HYA8 995 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 YOD1Q5VVQ6 348 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-220ENST00000561253 G2E3Q7L622 706 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 HOMER1Q86YM7 354 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 BCL7CQ8WUZ0 217 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-220ENST00000561253 CCDC140Q96MF4 163 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 IER2Q9BTL4 223 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 NKX2-4Q9H2Z4 354 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 CYP26B1Q9NR63 512 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 FANCLQ9NW38 375 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 TMEM260Q9NX78 707 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 DBF4Q9UBU7 674 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-220ENST00000561253 SCN7AQ01118 1682 aa7.57□□□□□ -1.2
LRRC28-220ENST00000561253 MAP3K15Q6ZN16 1313 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ERVV-1B6SEH8 477 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 FKTNO75072 461 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 CDC45O75419 566 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ZNF205O95201 554 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ESR1P03372 595 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 GSTM1P09488 218 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 MYL6BP14649 208 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ENDOUP21128 410 aaKnown RBP7.56□□□□□ -1.2
LRRC28-220ENST00000561253 CD96P40200 585 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 CD97P48960 835 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 DDR1Q08345 913 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 SCRN1Q12765 414 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 HLFQ16534 295 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
LRRC28-220ENST00000561253 CCDC30Q5VVM6 783 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 COPS6Q7L5N1 327 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 SCUBE1Q8IWY4 988 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 SSH1Q8WYL5 1049 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 FCRL3Q96P31 734 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-220ENST00000561253 SLC12A9Q9BXP2 914 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 MTFR1LQ9H019 292 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ANGEL1Q9UNK9 670 aaKnown RBP7.56□□□□□ -1.2
LRRC28-220ENST00000561253 BACE2Q9Y5Z0 518 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ADCY9O60503 1353 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 BCORQ6W2J9 1755 aa7.56□□□□□ -1.2
LRRC28-220ENST00000561253 ATP10DQ9P241 1426 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 C2orf71A6NGG8 1288 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 ENPP3O14638 875 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 TCERG1O14776 1098 aaKnown RBP7.55□□□□□ -1.2
LRRC28-220ENST00000561253 AURKAO14965 403 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 ADAM23O75077 832 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 CLSTN1O94985 981 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 PRNPP04156 253 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 PABPC1P11940 636 aaKnown RBP7.55□□□□□ -1.2
LRRC28-220ENST00000561253 IFNGR1P15260 489 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 RPL10P27635 214 aaKnown RBP7.55□□□□□ -1.2
LRRC28-220ENST00000561253 L1CAMP32004 1257 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 RFC4P35249 363 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 ECI1P42126 302 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 SEPHS1P49903 392 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 RARSP54136 660 aaKnown RBP7.55□□□□□ -1.2
LRRC28-220ENST00000561253 NFIXQ14938 502 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 CLEC4GQ6UXB4 293 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 VSIG10LQ86VR7 867 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 KCTD13Q8WZ19 329 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 MCMBPQ9BTE3 642 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 DHRS4Q9BTZ2 278 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 CARS2Q9HA77 564 aaKnown RBP7.55□□□□□ -1.2
LRRC28-220ENST00000561253 HYPKQ9NX55 129 aa7.55□□□□□ -1.2
LRRC28-220ENST00000561253 UBN2Q6ZU65 1347 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 LRP5O75197 1615 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 CCDC163A0A0D9SF12 145 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 POLRMTO00411 1230 aaKnown RBP7.54□□□□□ -1.2
LRRC28-220ENST00000561253 CPP00450 1065 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 CAPNS1P04632 268 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 CD8BP10966 210 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 SPINK2P20155 84 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 HSD3B2P26439 372 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 GFRA1P56159 465 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 TEKQ02763 1124 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 SF1Q15637 639 aaKnown RBP7.54□□□□□ -1.2
LRRC28-220ENST00000561253 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 FAM209AQ5JX71 171 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 FOXB2Q5VYV0 432 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
LRRC28-220ENST00000561253 KSR1Q8IVT5 923 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms