RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 POLE2P56282 527 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 NR5A1Q13285 461 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 UNC5CLQ8IV45 518 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 IGBP1P78318 339 aa14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 CAV1Q03135 178 aa14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 KIF22Q14807 665 aa14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 LRRC23Q53EV4 343 aaPredicted RBP14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 OR6B2Q6IFH4 312 aa14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 ABI1Q8IZP0 508 aa14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 NLGN1Q8N2Q7 840 aa14.21□□□□□ -0.14
CSPG4P11-201ENST00000560634 NCF2P19878 526 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 MAGEA9P43362 315 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 NBPF10Q6P3W6 841 aaKnown RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 GADL1Q6ZQY3 521 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 TTC13Q8NBP0 860 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 ADAMTS1Q9UHI8 967 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 DISP1Q96F81 1524 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 COBLO75128 1261 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 DYNLT1P63172 113 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 CC2D2BQ6DHV5 1058 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 CHAMP1Q96JM3 812 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 ATP8B3O60423 1300 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SPAG7O75391 227 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 PLCG1P19174 1290 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 MDM2Q00987 491 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 GRAMD1BQ3KR37 738 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 MMS22LQ6ZRQ5 1243 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZNF589Q86UQ0 364 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 PUS3Q9BZE2 481 aaKnown RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 MRPL40Q9NQ50 206 aaKnown RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 KRT38O76015 456 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 TJP3O95049 919 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 OCRLQ01968 901 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 KRT31Q15323 416 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SLFNL1Q499Z3 407 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 TAF1BQ53T94 588 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 TRIM67Q6ZTA4 783 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SULF1Q8IWU6 871 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 GRAMD1CQ8IYS0 662 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 PIGSQ96S52 555 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SUN2Q9UH99 717 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 AKT3Q9Y243 479 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 SYNGAP1Q96PV0 1343 aa14.2□□□□□ -0.14
CSPG4P11-201ENST00000560634 TAC1P20366 129 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 TFDP2Q14188 446 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 ARL13BQ3SXY8 428 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 FBXO38Q6PIJ6 1188 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 STOML1Q9UBI4 398 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 NFU1Q9UMS0 254 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 CFLARO15519 480 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 TADA3O75528 432 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 ARL4CP56559 192 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 FSCBQ5H9T9 825 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 TEDDM1Q5T9Z0 273 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 PIP4K2CQ8TBX8 421 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 RBM41Q96IZ5 413 aaKnown RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 TMEM60Q9H2L4 133 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 PCIF1Q9H4Z3 704 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 SUCLA2Q9P2R7 463 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 NXF1Q9UBU9 619 aaKnown RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 SIX6OS1Q8N1H7 587 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 MORC4Q8TE76 937 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 DEPDC1BQ8WUY9 529 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 POLR3CQ9BUI4 534 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 LDHAP00338 332 aaKnown RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 FGGP02679 453 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 PLS3P13797 630 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 NFKBIAP25963 317 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 TBC1D1Q86TI0 1168 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 C7orf31Q8N865 590 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 PRPF38AQ8NAV1 312 aaKnown RBP14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 APOL6Q9BWW8 343 aa14.19□□□□□ -0.14
CSPG4P11-201ENST00000560634 BBOX1O75936 387 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 IFNA8P32881 189 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 DGKHQ86XP1 1220 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 GDAP1Q8TB36 358 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 N4BP2L2Q92802 583 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ZBTB18Q99592 522 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ELAC2Q9BQ52 826 aaKnown RBP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 KLC2Q9H0B6 622 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 SH3GLB2Q9NR46 395 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 TERF2Q15554 542 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 TMED8Q6PL24 325 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 TADA2BQ86TJ2 420 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 PROM2Q8N271 834 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 MAML1Q92585 1016 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 GINM1Q9NU53 330 aa14.18□□□□□ -0.14
CSPG4P11-201ENST00000560634 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms