RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ACTR2P61160 394 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 ADAM17P78536 824 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 MRPS5P82675 430 aaKnown RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 ADGRE1Q14246 886 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 MBTPS1Q14703 1052 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 GPNMBQ14956 572 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 MIS18BP1Q6P0N0 1132 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 RUFY3Q7L099 469 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 PPM1EQ8WY54 764 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 WNT8BQ93098 351 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 COL25A1Q9BXS0 654 aaPredicted RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 AGO4Q9HCK5 861 aaKnown RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 FAM217BQ9NTX9 383 aaPredicted RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 CHD9Q3L8U1 2897 aa16.02■□□□□ 0.15
TPM1-223ENST00000560445 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.15
TPM1-223ENST00000560445 UNC80Q8N2C7 3258 aa16.02■□□□□ 0.15
TPM1-223ENST00000560445 MBLAC1A4D2B0 266 aaPredicted RBP16.01■□□□□ 0.15
TPM1-223ENST00000560445 CDKL5O76039 1030 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 CYP3A4P08684 503 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 MARK3P27448 753 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 DEFB103AP81534 67 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 ODR4Q5SWX8 454 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 TYW1BQ6NUM6 668 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 YME1L1Q96TA2 773 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 COG5Q9UP83 839 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 SQORQ9Y6N5 450 aa16.01■□□□□ 0.15
TPM1-223ENST00000560445 COL1A2P08123 1366 aa16■□□□□ 0.15
TPM1-223ENST00000560445 COL4A6Q14031 1691 aa16■□□□□ 0.15
TPM1-223ENST00000560445 BACH1O14867 736 aa16■□□□□ 0.15
TPM1-223ENST00000560445 KRT76Q01546 638 aa16■□□□□ 0.15
TPM1-223ENST00000560445 HIC1Q14526 733 aa16■□□□□ 0.15
TPM1-223ENST00000560445 SKIV2LQ15477 1246 aaKnown RBP16■□□□□ 0.15
TPM1-223ENST00000560445 JAKMIP3Q5VZ66 844 aa16■□□□□ 0.15
TPM1-223ENST00000560445 SMAP1Q8IYB5 467 aaPredicted RBP16■□□□□ 0.15
TPM1-223ENST00000560445 MICALL1Q8N3F8 863 aa16■□□□□ 0.15
TPM1-223ENST00000560445 NME8Q8N427 588 aa16■□□□□ 0.15
TPM1-223ENST00000560445 ZNF577Q9BSK1 485 aa16■□□□□ 0.15
TPM1-223ENST00000560445 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
TPM1-223ENST00000560445 FTHL17Q9BXU8 183 aa16■□□□□ 0.15
TPM1-223ENST00000560445 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
TPM1-223ENST00000560445 RWDD3Q9Y3V2 267 aa16■□□□□ 0.15
TPM1-223ENST00000560445 POTEB3A0JP26 581 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 IPO5O00410 1097 aaKnown RBP15.99■□□□□ 0.15
TPM1-223ENST00000560445 ERVK-21P61565 698 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 MRPS6P82932 125 aaKnown RBP15.99■□□□□ 0.15
TPM1-223ENST00000560445 CCDC85BQ15834 202 aaPredicted RBP15.99■□□□□ 0.15
TPM1-223ENST00000560445 PTPROQ16827 1216 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 GALNT17Q6IS24 598 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 ZNF746Q6NUN9 644 aaPredicted RBP15.99■□□□□ 0.15
TPM1-223ENST00000560445 POTEBQ6S5H4 581 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 TSHZ1Q6ZSZ6 1077 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 ZNF274Q96GC6 653 aaPredicted RBP15.99■□□□□ 0.15
TPM1-223ENST00000560445 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 PCDHA2Q9Y5H9 948 aa15.99■□□□□ 0.15
TPM1-223ENST00000560445 LINC01553A4QN01 128 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 HBP1O60381 514 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 ATG7O95352 703 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 DEXIO95424 95 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 ARP10275 920 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 INSRRP14616 1297 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 CPA1P15085 419 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 XBP1P17861 261 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
TPM1-223ENST00000560445 IGBP1P78318 339 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 HTRA4P83105 476 aaPredicted RBP15.98■□□□□ 0.15
TPM1-223ENST00000560445 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
TPM1-223ENST00000560445 ANKRD1Q15327 319 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
TPM1-223ENST00000560445 ATP8B4Q8TF62 1192 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 FAM167AQ96KS9 214 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 ASB2Q96Q27 587 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 CERS4Q9HA82 394 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 ZNF302Q9NR11 478 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 TMEM260Q9NX78 707 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 MTCH2Q9Y6C9 303 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 PTPRSQ13332 1948 aa15.98■□□□□ 0.15
TPM1-223ENST00000560445 SIP14410 1827 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 SMIM35A0A1B0GVV1 85 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 PSAPP07602 524 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 USP11P51784 963 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 NLRP5P59047 1200 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 GRB10Q13322 594 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 ITGB3BPQ13352 177 aaPredicted RBP15.97■□□□□ 0.15
TPM1-223ENST00000560445 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
TPM1-223ENST00000560445 PLCB4Q15147 1175 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 ZNF484Q5JVG2 852 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 FAM117BQ6P1L5 589 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 PDXDC2PQ6P474 469 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 FBXO22Q8NEZ5 403 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 PHKBQ93100 1093 aa15.97■□□□□ 0.15
TPM1-223ENST00000560445 TOP1MTQ969P6 601 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms