RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 REXO1L1PQ8IX06 675 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 CHST13Q8NET6 341 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 SH3RF2Q8TEC5 729 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 THAP3Q8WTV1 239 aaPredicted RBP5.66□□□□□ -1.5
SPG11-218ENST00000559754 KISS1RQ969F8 398 aaPredicted RBP5.66□□□□□ -1.5
SPG11-218ENST00000559754 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 KCND1Q9NSA2 647 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 NDOR1Q9UHB4 597 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 PCDHA9Q9Y5H5 950 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 CCDC66A2RUB6 948 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 NPEPPSL1A6NEC2 478 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 KLHL18O94889 574 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 KNG1P01042 644 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 KRT15P19012 456 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 EPHB4P54760 987 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 ADAM17P78536 824 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 RALYLQ86SE5 291 aaKnown RBP5.65□□□□□ -1.5
SPG11-218ENST00000559754 IFNL2Q8IZJ0 200 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 STPG3Q8N7X2 389 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 NUDT10Q8NFP7 164 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 NUDT11Q96G61 164 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 AJUBAQ96IF1 538 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 MAGEB10Q96LZ2 347 aaPredicted RBP5.65□□□□□ -1.5
SPG11-218ENST00000559754 DNAJC7Q99615 494 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 JADE2Q9NQC1 790 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 ARHGAP28Q9P2N2 729 aa5.65□□□□□ -1.5
SPG11-218ENST00000559754 SHROOM4Q9ULL8 1493 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 MAN2B1O00754 1011 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 B4GALT4O60513 344 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 CLASP2O75122 1294 aaKnown RBP5.64□□□□□ -1.51
SPG11-218ENST00000559754 AMY2AP04746 511 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 AMY2BP19961 511 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 DNM2P50570 870 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 HERVK_113P62684 666 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
SPG11-218ENST00000559754 ZXDCQ2QGD7 858 aaPredicted RBP5.64□□□□□ -1.51
SPG11-218ENST00000559754 TRIM61Q5EBN2 209 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 PHF19Q5T6S3 580 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 CPZQ66K79 652 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 SLFN13Q68D06 897 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 OSTM1Q86WC4 334 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 CIR1Q86X95 450 aaPredicted RBP5.64□□□□□ -1.51
SPG11-218ENST00000559754 PTRH1Q86Y79 214 aaKnown RBP5.64□□□□□ -1.51
SPG11-218ENST00000559754 JMYQ8N9B5 988 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 GSTCDQ8NEC7 633 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 PMFBP1Q8TBY8 1022 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 MRPL4Q9BYD3 311 aaKnown RBP5.64□□□□□ -1.51
SPG11-218ENST00000559754 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 SLC52A2Q9HAB3 445 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 PPP4R1LQ9P1A2 415 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 CBLCQ9ULV8 474 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 MYRFQ9Y2G1 1151 aa5.64□□□□□ -1.51
SPG11-218ENST00000559754 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 CUTAO60888 179 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 IL18BPO95998 194 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 JAM2P57087 298 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 KRTAP10-2P60368 255 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 NFE2L2Q16236 605 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 ZNF568Q3ZCX4 644 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 C2orf27AQ580R0 203 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 LIMS2Q7Z4I7 341 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 TACO1Q9BSH4 297 aaKnown RBP5.63□□□□□ -1.51
SPG11-218ENST00000559754 SSBP3Q9BWW4 388 aaPredicted RBP5.63□□□□□ -1.51
SPG11-218ENST00000559754 SLC39A2Q9NP94 309 aa5.63□□□□□ -1.51
SPG11-218ENST00000559754 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
SPG11-218ENST00000559754 PRAMEF25A6NGN4 478 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 NPTXRO95502 500 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 POLD1P28340 1107 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 CXXC5Q7LFL8 322 aaKnown RBP5.62□□□□□ -1.51
SPG11-218ENST00000559754 SREK1Q8WXA9 508 aaKnown RBP5.62□□□□□ -1.51
SPG11-218ENST00000559754 C8orf49Q96NF6 230 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 C1QTNF3Q9BXJ4 246 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 CELF4Q9BZC1 486 aaKnown RBP5.62□□□□□ -1.51
SPG11-218ENST00000559754 KATNBL1Q9H079 304 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 OSBPL2Q9H1P3 480 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 SEC61A2Q9H9S3 476 aa5.62□□□□□ -1.51
SPG11-218ENST00000559754 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.61□□□□□ -1.51
SPG11-218ENST00000559754 LOC105371045A0A1W2PR82 267 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 PTGS1P23219 599 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 AOAHP28039 575 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 CSF2RBP32927 897 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 USP10Q14694 798 aaKnown RBP5.61□□□□□ -1.51
SPG11-218ENST00000559754 WDR48Q8TAF3 677 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 SLC7A14Q8TBB6 771 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 DVL3Q92997 716 aaPredicted RBP5.61□□□□□ -1.51
SPG11-218ENST00000559754 CARD11Q9BXL7 1154 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 SMURF1Q9HCE7 757 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 INCENPQ9NQS7 918 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 GALNT8Q9NY28 637 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 FBXO10Q9UK96 956 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 SLC4A7Q9Y6M7 1214 aa5.61□□□□□ -1.51
SPG11-218ENST00000559754 C1QTNF3-AMACRE9PGA6 284 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 KCNQ2O43526 872 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 C4BPAP04003 597 aaKnown RBP5.6□□□□□ -1.51
SPG11-218ENST00000559754 INSRRP14616 1297 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 WDR72Q3MJ13 1102 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 GGNQ86UU5 652 aa5.6□□□□□ -1.51
SPG11-218ENST00000559754 CISD2Q8N5K1 135 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms