RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 CCDC155Q8N6L0 562 aa17.6■□□□□ 0.41
USP8-208ENST00000559329 RIT2Q99578 217 aa17.6■□□□□ 0.41
USP8-208ENST00000559329 MMRN2Q9H8L6 949 aa17.6■□□□□ 0.41
USP8-208ENST00000559329 ARHGAP20Q9P2F6 1191 aa17.6■□□□□ 0.41
USP8-208ENST00000559329 FAM184BQ9ULE4 1060 aa17.6■□□□□ 0.41
USP8-208ENST00000559329 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
USP8-208ENST00000559329 PDXKO00764 312 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 CETN3O15182 167 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 ERCC3P19447 782 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 RASSF7Q02833 373 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 DGKZQ13574 1117 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 MCF2L2Q86YR7 1114 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 CCDC125Q86Z20 511 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 TPH2Q8IWU9 490 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 PIGOQ8TEQ8 1089 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 NAPGQ99747 312 aaPredicted RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 WRAP73Q9P2S5 460 aaPredicted RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 ZNF263O14978 683 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 NOL4O94818 638 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 LCA5LO95447 670 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 VCAM1P19320 739 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 NR2F2P24468 414 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 AMPD2Q01433 879 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 PDXDC1Q6P996 788 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 IL31RAQ8NI17 732 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 ZFP91Q96JP5 570 aaPredicted RBP17.59■□□□□ 0.41
USP8-208ENST00000559329 TEKT3Q9BXF9 490 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 ZNF112Q9UJU3 913 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
USP8-208ENST00000559329 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.59■□□□□ 0.41
USP8-208ENST00000559329 ASTN1O14525 1302 aa17.58■□□□□ 0.41
USP8-208ENST00000559329 RCCD1A6NED2 376 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 LRRC53A6NM62 1247 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 PLEKP08567 350 aaPredicted RBP17.58■□□□□ 0.4
USP8-208ENST00000559329 ZNF131P52739 623 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
USP8-208ENST00000559329 NEK11Q8NG66 645 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.4
USP8-208ENST00000559329 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
USP8-208ENST00000559329 MAP3K20Q9NYL2 800 aaKnown RBP17.58■□□□□ 0.4
USP8-208ENST00000559329 KCND2Q9NZV8 630 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 LOXHD1Q8IVV2 1947 aa17.58■□□□□ 0.4
USP8-208ENST00000559329 ZBTB39O15060 712 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 EIF3DO15371 548 aaKnown RBP eCLIP17.57■□□□□ 0.4
USP8-208ENST00000559329 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
USP8-208ENST00000559329 MTMR2Q13614 643 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 NEK9Q8TD19 979 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
USP8-208ENST00000559329 JAKMIP2Q96AA8 810 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 NACC1Q96RE7 527 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 FIZ1Q96SL8 496 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 LACRTQ9GZZ8 138 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 CEP72Q9P209 647 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 GUCA1BQ9UMX6 200 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 TFR2Q9UP52 801 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 UBIAD1Q9Y5Z9 338 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 DHX15O43143 795 aaKnown RBP17.57■□□□□ 0.4
USP8-208ENST00000559329 CALUO43852 315 aaPredicted RBP17.57■□□□□ 0.4
USP8-208ENST00000559329 VAV2P52735 878 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 MUM1L1Q5H9M0 696 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 CCDC122Q5T0U0 273 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 PCNX4Q63HM2 1172 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 RRAGAQ7L523 313 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 SRGAP1Q7Z6B7 1085 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 CCDC42Q96M95 316 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
USP8-208ENST00000559329 KCNH7Q9NS40 1196 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 ZMYM2Q9UBW7 1377 aa17.57■□□□□ 0.4
USP8-208ENST00000559329 ZNF541Q9H0D2 1346 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 FLOT1O75955 427 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 ALAS1P13196 640 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 USP14P54578 494 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 ASTE1Q2TB18 679 aaPredicted RBP17.56■□□□□ 0.4
USP8-208ENST00000559329 HGSNATQ68CP4 663 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 KIAA1328Q86T90 577 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 SYN2Q92777 582 aaPredicted RBP17.56■□□□□ 0.4
USP8-208ENST00000559329 LXNQ9BS40 222 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 RPAP3Q9H6T3 665 aaPredicted RBP17.56■□□□□ 0.4
USP8-208ENST00000559329 ZNF446Q9NWS9 450 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 SEL1LQ9UBV2 794 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 PPP1R1BQ9UD71 204 aaPredicted RBP17.56■□□□□ 0.4
USP8-208ENST00000559329 DDX41Q9UJV9 622 aaKnown RBP17.56■□□□□ 0.4
USP8-208ENST00000559329 PNMA2Q9UL42 364 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 RLFQ13129 1914 aa17.56■□□□□ 0.4
USP8-208ENST00000559329 SLC16A3O15427 465 aaKnown RBP17.55■□□□□ 0.4
USP8-208ENST00000559329 TGFB1I1O43294 461 aa17.55■□□□□ 0.4
USP8-208ENST00000559329 KRT86O43790 486 aa17.55■□□□□ 0.4
USP8-208ENST00000559329 IPO7O95373 1038 aaKnown RBP17.55■□□□□ 0.4
USP8-208ENST00000559329 GCNT3O95395 438 aa17.55■□□□□ 0.4
USP8-208ENST00000559329 KIF11P52732 1056 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms