RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TRIM71Q2Q1W2 868 aaKnown RBP21.15■□□□□ 0.98
CASC4-209ENST00000559222 C9orf50Q5SZB4 431 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 SWSAP1Q6NVH7 229 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 TRAPPC12Q8WVT3 735 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 RIT2Q99578 217 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 UBE2OQ9C0C9 1292 aaKnown RBP21.15■□□□□ 0.98
CASC4-209ENST00000559222 FOXP1Q9H334 677 aaPredicted RBP21.15■□□□□ 0.98
CASC4-209ENST00000559222 SMARCAD1Q9H4L7 1026 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 ERAP1Q9NZ08 941 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 VAV3Q9UKW4 847 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 NOD1Q9Y239 953 aa21.15■□□□□ 0.98
CASC4-209ENST00000559222 BACH1O14867 736 aa21.14■□□□□ 0.97
CASC4-209ENST00000559222 GCFC2P16383 781 aaKnown RBP21.14■□□□□ 0.97
CASC4-209ENST00000559222 STAT5BP51692 787 aa21.14■□□□□ 0.97
CASC4-209ENST00000559222 ADAM17P78536 824 aa21.14■□□□□ 0.97
CASC4-209ENST00000559222 MFSD5Q6N075 450 aa21.14■□□□□ 0.97
CASC4-209ENST00000559222 NOSTRINQ8IVI9 506 aa21.14■□□□□ 0.97
CASC4-209ENST00000559222 TMEM60Q9H2L4 133 aa21.14■□□□□ 0.97
CASC4-209ENST00000559222 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.14■□□□□ 0.97
CASC4-209ENST00000559222 RANBP2P49792 3224 aaKnown RBP21.13■□□□□ 0.97
CASC4-209ENST00000559222 IGSF9BQ9UPX0 1349 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 EML1O00423 815 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 ACRP10323 421 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 U2AF2P26368 475 aaKnown RBP eCLIP21.13■□□□□ 0.974e-6■■■■□ 26.4
CASC4-209ENST00000559222 BMP8BP34820 402 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 FPGSQ05932 587 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 PPFIA1Q13136 1202 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 GRIK4Q16099 956 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 MIS18BP1Q6P0N0 1132 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 RUFY4Q6ZNE9 571 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 C16orf59Q7L2K0 433 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 AFAP1L1Q8TED9 768 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 ATP6V0A1Q93050 837 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 SNX21Q969T3 373 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 AZI2Q9H6S1 392 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 ZNF302Q9NR11 478 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 DISC1Q9NRI5 854 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 GABBR1Q9UBS5 961 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 TET1Q8NFU7 2136 aa21.13■□□□□ 0.97
CASC4-209ENST00000559222 WDR64B1ANS9 1081 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 ZNF862O60290 1169 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 INSRRP14616 1297 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 MCM7P33993 719 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 TOB1P50616 345 aaPredicted RBP21.12■□□□□ 0.97
CASC4-209ENST00000559222 IGBP1P78318 339 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 MARCH8Q5T0T0 291 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 PDXDC2PQ6P474 469 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 TRAF7Q6Q0C0 670 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 PLPPR4Q7Z2D5 763 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 TRMT1LQ7Z2T5 733 aaKnown RBP21.12■□□□□ 0.97
CASC4-209ENST00000559222 SERINC5Q86VE9 423 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 SMAP1Q8IYB5 467 aaPredicted RBP21.12■□□□□ 0.97
CASC4-209ENST00000559222 TRPC6Q9Y210 931 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 SAMM50Q9Y512 469 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 PCDHA10Q9Y5I2 948 aa21.12■□□□□ 0.97
CASC4-209ENST00000559222 TRIOBPQ9H2D6 2365 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 PSAPP07602 524 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 SPIRE1Q08AE8 756 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 PTK7Q13308 1070 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 GNL2Q13823 731 aaKnown RBP21.11■□□□□ 0.97
CASC4-209ENST00000559222 GPNMBQ14956 572 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 SHHQ15465 462 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 ZNF174Q15697 407 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 HABP4Q5JVS0 413 aaKnown RBP21.11■□□□□ 0.97
CASC4-209ENST00000559222 MCTP1Q6DN14 999 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 MIER3Q7Z3K6 550 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 OSBPL7Q9BZF2 842 aa21.11■□□□□ 0.97
CASC4-209ENST00000559222 MAFBQ9Y5Q3 323 aaPredicted RBP21.11■□□□□ 0.97
CASC4-209ENST00000559222 ZBTB42B2RXF5 422 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 NEMFO60524 1076 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 CKBP12277 381 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 FAM160B1Q5W0V3 765 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 NAP1L4Q99733 375 aaKnown RBP21.1■□□□□ 0.97
CASC4-209ENST00000559222 TCEAL9Q9UHQ7 104 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 KIF3AQ9Y496 699 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 EVPLQ92817 2033 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 ARID2Q68CP9 1835 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 PTPRSQ13332 1948 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 LOXHD1Q8IVV2 1947 aa21.1■□□□□ 0.97
CASC4-209ENST00000559222 NRCAMQ92823 1304 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 POTEB3A0JP26 581 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 TMEM150BA6NC51 233 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 IQCF3P0C7M6 154 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 JAK3P52333 1124 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 RBL2Q08999 1139 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 PPP2R5CQ13362 524 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 MBTPS1Q14703 1052 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 CALCRLQ16602 461 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 TCTN1Q2MV58 587 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 TTC38Q5R3I4 469 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 ZNF618Q5T7W0 954 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 LARP1BQ659C4 914 aaKnown RBP21.09■□□□□ 0.97
CASC4-209ENST00000559222 POTEBQ6S5H4 581 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 BANK1Q8NDB2 785 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 ATP8B4Q8TF62 1192 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 FAM20AQ96MK3 541 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 MTMR9Q96QG7 549 aa21.09■□□□□ 0.97
CASC4-209ENST00000559222 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.09■□□□□ 0.976e-12■□□□□ 8.7
CASC4-209ENST00000559222 WRAP73Q9P2S5 460 aaPredicted RBP21.09■□□□□ 0.97
CASC4-209ENST00000559222 MBLAC1A4D2B0 266 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms