RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CHMP4BP1P59074 171 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 TPH2Q8IWU9 490 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 ATRIPQ8WXE1 791 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 TBC1D5Q92609 795 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
CLPX-204ENST00000559152 SSU72P8A0A1W2PR75 194 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 EIF3DO15371 548 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLPX-204ENST00000559152 SLC16A3O15427 465 aaKnown RBP12.44□□□□□ -0.42
CLPX-204ENST00000559152 TUBBP07437 444 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 NR2F2P24468 414 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 USP14P54578 494 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 BMS1Q14692 1282 aaKnown RBP12.44□□□□□ -0.42
CLPX-204ENST00000559152 RINT1Q6NUQ1 792 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 TMCO3Q6UWJ1 677 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 RRAGAQ7L523 313 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 LUC7LQ9NQ29 371 aaKnown RBP12.44□□□□□ -0.42
CLPX-204ENST00000559152 MYO6Q9UM54 1294 aa12.44□□□□□ -0.42
CLPX-204ENST00000559152 ANO9A1A5B4 782 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 AKR1B10O60218 316 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 FAM13AO94988 1023 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 DYDC2Q96IM9 177 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 TEPSINQ96N21 525 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 FGFBP2Q9BYJ0 223 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 GLIS2Q9BZE0 524 aaPredicted RBP12.43□□□□□ -0.42
CLPX-204ENST00000559152 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 FBXO28Q9NVF7 368 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 ARMCX3Q9UH62 379 aaPredicted RBP12.43□□□□□ -0.42
CLPX-204ENST00000559152 ODF2LQ9ULJ1 636 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
CLPX-204ENST00000559152 UBE4BO95155 1302 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 LTBP3Q9NS15 1303 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 LRRC53A6NM62 1247 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 IPO5O00410 1097 aaKnown RBP12.43□□□□□ -0.42
CLPX-204ENST00000559152 INPP5BP32019 993 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
CLPX-204ENST00000559152 CTTNQ14247 550 aaKnown RBP12.43□□□□□ -0.42
CLPX-204ENST00000559152 NFIL3Q16649 462 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 TEX35Q5T0J7 233 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 DCAF15Q66K64 600 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 BAP1Q92560 729 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 PARVGQ9HBI0 331 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 ARHGAP20Q9P2F6 1191 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 RPTORQ8N122 1335 aa12.43□□□□□ -0.42
CLPX-204ENST00000559152 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 CTAGE15A4D2H0 777 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLPX-204ENST00000559152 CHMP2AO43633 222 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 PPP1R12BO60237 982 aaPredicted RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 GCNT3O95395 438 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 CTAGE8P0CG41 777 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 EPB41P11171 864 aaKnown RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 CLCN6P51797 869 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 KIF11P52732 1056 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 SFMBT2Q5VUG0 894 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 B3GNT9Q6UX72 402 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 CTAGE6Q86UF2 777 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 CTAGE4Q8IX94 777 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 SECISBP2LQ93073 1101 aaKnown RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 RPGRIP1Q96KN7 1286 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 AGBL1Q96MI9 1066 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 ARID3AQ99856 593 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 RUSC1Q9BVN2 902 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 IFIH1Q9BYX4 1025 aaKnown RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 PCDHA13Q9Y5I0 950 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 ZNF536O15090 1300 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 ZBED4O75132 1171 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 ABL1P00519 1130 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 SERPING1P05155 500 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 CASP5P51878 434 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 PCNX4Q63HM2 1172 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 TRIM58Q8NG06 486 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 PURBQ96QR8 312 aaKnown RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
CLPX-204ENST00000559152 SAR1BQ9Y6B6 198 aa12.42□□□□□ -0.42
CLPX-204ENST00000559152 FRMPD4Q14CM0 1322 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 EPHB6O15197 1021 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
CLPX-204ENST00000559152 NR3C1P04150 777 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 MYBP10242 640 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 ARP10275 920 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 GUCY2CP25092 1073 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 EIF4A3P38919 411 aaKnown RBP12.41□□□□□ -0.42
CLPX-204ENST00000559152 ZNF131P52739 623 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 AMPD2Q01433 879 aa12.41□□□□□ -0.42
CLPX-204ENST00000559152 CKAP4Q07065 602 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms