RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 NTRK3Q16288 839 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 ANGEL2Q5VTE6 544 aaKnown RBP7.73□□□□□ -1.17
LRRC28-209ENST00000558861 KIAA0907Q7Z7F0 614 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-209ENST00000558861 VSIG10LQ86VR7 867 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 NPLOC4Q8TAT6 608 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 CCDC140Q96MF4 163 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 NCOA5Q9HCD5 579 aaKnown RBP7.73□□□□□ -1.17
LRRC28-209ENST00000558861 CLEC1BQ9P126 229 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 CICQ96RK0 1608 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-209ENST00000558861 RREB1Q92766 1687 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 LY75O60449 1722 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 KAT6BQ8WYB5 2073 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 UBR2Q8IWV8 1755 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 FGF10O15520 208 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ADAM23O75077 832 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 CPP00450 1065 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 C6orf222P0C671 652 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-209ENST00000558861 PLS3P13797 630 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ZP2Q05996 745 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ITPK1Q13572 414 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 TCEA2Q15560 299 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 EZH2Q15910 746 aaKnown RBP7.72□□□□□ -1.17
LRRC28-209ENST00000558861 TXNRD1Q16881 649 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 C21orf62-AS1Q17RA5 79 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 EEF1DP3Q658K8 133 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ZNF790Q6PG37 636 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 KSR1Q8IVT5 923 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 FLCNQ8NFG4 579 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 SYTL4Q96C24 671 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-209ENST00000558861 FEZ1Q99689 392 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 PRDM7Q9NQW5 492 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ERVK13-1Q9NX77 482 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ZNF281Q9Y2X9 895 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 ZNF831Q5JPB2 1677 aa7.72□□□□□ -1.17
LRRC28-209ENST00000558861 LMOD3Q0VAK6 560 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 TEFQ10587 303 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-209ENST00000558861 AMIGO3Q86WK7 504 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 CCDC103Q8IW40 242 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 NAT16Q8N8M0 369 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.18
LRRC28-209ENST00000558861 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-209ENST00000558861 PTCHD1Q96NR3 888 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 SLAMF8Q9P0V8 285 aa7.71□□□□□ -1.18
LRRC28-209ENST00000558861 TMEFF2Q9UIK5 374 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-209ENST00000558861 ANGEL1Q9UNK9 670 aaKnown RBP7.71□□□□□ -1.18
LRRC28-209ENST00000558861 VIRMAQ69YN4 1812 aaKnown RBP7.71□□□□□ -1.18
LRRC28-209ENST00000558861 GOLGB1Q14789 3259 aaKnown RBP7.7□□□□□ -1.18
LRRC28-209ENST00000558861 NUP188Q5SRE5 1749 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 DNAJC25-GNG10A0A024R161 153 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 CCDC163A0A0D9SF12 145 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 ARNTLO00327 626 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 ADAMTS4O75173 837 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 MBLAC2Q68D91 279 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 SYNPOQ8N3V7 929 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 PAK6Q9NQU5 681 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-209ENST00000558861 MIS18AQ9NYP9 233 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 LMCD1Q9NZU5 365 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 EBF1Q9UH73 591 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 IL16Q14005 1332 aa7.7□□□□□ -1.18
LRRC28-209ENST00000558861 KDM3BQ7LBC6 1761 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 NPHP3-ACAD11A0A0J9YXS1 232 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 BTBD11A6QL63 1104 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 MEFVO15553 781 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-209ENST00000558861 ENDOUP21128 410 aaKnown RBP7.69□□□□□ -1.18
LRRC28-209ENST00000558861 EIF4A1P60842 406 aaKnown RBP7.69□□□□□ -1.18
LRRC28-209ENST00000558861 ZNF827Q17R98 1081 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 KCNT2Q6UVM3 1135 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 WDR63Q8IWG1 891 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 TRMT2AQ8IZ69 625 aaKnown RBP7.69□□□□□ -1.18
LRRC28-209ENST00000558861 FCRL2Q96LA5 508 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-209ENST00000558861 CLUHP3Q96NS8 147 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 G6PC3Q9BUM1 346 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 ADAMTS10Q9H324 1103 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 PCMTD2Q9NV79 361 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 IFT57Q9NWB7 429 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 C5P01031 1676 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 TJP1Q07157 1748 aa7.69□□□□□ -1.18
LRRC28-209ENST00000558861 UTRNP46939 3433 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 PRAMEF22A3QJZ6 481 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 PLD2O14939 933 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 PAMP19021 973 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 CANXP27824 592 aaKnown RBP7.68□□□□□ -1.18
LRRC28-209ENST00000558861 GYS2P54840 703 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 LAPTM5Q13571 262 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 KRT24Q2M2I5 525 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 ACBD5Q5T8D3 534 aaPredicted RBP7.68□□□□□ -1.18
LRRC28-209ENST00000558861 CPNE8Q86YQ8 564 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 DNAJC10Q8IXB1 793 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 TMEM52Q8NDY8 209 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 SLC7A14Q8TBB6 771 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 MAP6Q96JE9 813 aa7.68□□□□□ -1.18
LRRC28-209ENST00000558861 HHIPL1Q96JK4 782 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms