RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 UPP2O95045 317 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 FAM86B2P0C5J1 330 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 LINC00271P0C7V0 271 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 SREBF1P36956 1147 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 PLCB4Q15147 1175 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 SKIV2LQ15477 1246 aaKnown RBP15.5■□□□□ 0.07
VPS18-203ENST00000558855 JAKMIP3Q5VZ66 844 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 PPP1R18Q6NYC8 613 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 DNAJB3Q8WWF6 145 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 SEPT8Q92599 483 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
VPS18-203ENST00000558855 TGS1Q96RS0 853 aaKnown RBP15.5■□□□□ 0.07
VPS18-203ENST00000558855 EHMT1Q9H9B1 1298 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 AGO3Q9H9G7 860 aaKnown RBP15.5■□□□□ 0.07
VPS18-203ENST00000558855 AGO4Q9HCK5 861 aaKnown RBP15.5■□□□□ 0.07
VPS18-203ENST00000558855 JPH1Q9HDC5 661 aaPredicted RBP15.5■□□□□ 0.07
VPS18-203ENST00000558855 SLC9A2Q9UBY0 812 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 TUBE1Q9UJT0 475 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 BDP1A6H8Y1 2624 aa15.5■□□□□ 0.07
VPS18-203ENST00000558855 FNDC1Q4ZHG4 1894 aaPredicted RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 IGLV3-22A0A075B6J6 115 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 DDX39AO00148 427 aaKnown RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 TNFRSF10AO00220 468 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 GTPBP6O43824 516 aaPredicted RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 EFCAB14O75071 495 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 CAND2O75155 1236 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 AMHP03971 560 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 INSRRP14616 1297 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 ACTR2P61160 394 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 NTRK3Q16288 839 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 SYNE3Q6ZMZ3 975 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 GIMAP8Q8ND71 665 aaPredicted RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 RASGRP4Q8TDF6 673 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 GLG1Q92896 1179 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 PHKBQ93100 1093 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 TOP1MTQ969P6 601 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 CDHR1Q96JP9 859 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 UHRF1Q96T88 793 aaPredicted RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 IFIH1Q9BYX4 1025 aaKnown RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 RC3H2Q9HBD1 1191 aaKnown RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 ERAP1Q9NZ08 941 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
VPS18-203ENST00000558855 CDY2AQ9Y6F7 541 aa15.49■□□□□ 0.07
VPS18-203ENST00000558855 NFASCO94856 1347 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 MEIS1O00470 390 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 DHX15O43143 795 aaKnown RBP15.48■□□□□ 0.07
VPS18-203ENST00000558855 GNAT1P11488 350 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 METAP2P50579 478 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS18-203ENST00000558855 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 CEP55Q53EZ4 464 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 FBXO47Q5MNV8 452 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 RPAINQ86UA6 219 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 AGXT2Q9BYV1 514 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 FAM49AQ9H0Q0 323 aaPredicted RBP15.48■□□□□ 0.07
VPS18-203ENST00000558855 SMARCAD1Q9H4L7 1026 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 NCOA5Q9HCD5 579 aaKnown RBP15.48■□□□□ 0.07
VPS18-203ENST00000558855 INSL6Q9Y581 213 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 MYO7AQ13402 2215 aa15.48■□□□□ 0.07
VPS18-203ENST00000558855 DTNBO60941 627 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 ATG7O95352 703 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 SCG2P13521 617 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 ATP4AP20648 1035 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 KRT32Q14532 448 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 EPC2Q52LR7 807 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
VPS18-203ENST00000558855 CCDC60Q8IWA6 550 aaPredicted RBP15.47■□□□□ 0.07
VPS18-203ENST00000558855 FBXO22Q8NEZ5 403 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 KHSRPQ92945 711 aaKnown RBP eCLIP15.47■□□□□ 0.07
VPS18-203ENST00000558855 LARP6Q9BRS8 491 aaKnown RBP15.47■□□□□ 0.07
VPS18-203ENST00000558855 RAPGEFL1Q9UHV5 662 aa15.47■□□□□ 0.07
VPS18-203ENST00000558855 IGKV6D-21A0A0A0MT36 114 aa15.46■□□□□ 0.07
VPS18-203ENST00000558855 ZBTB42B2RXF5 422 aa15.46■□□□□ 0.07
VPS18-203ENST00000558855 CD52P31358 61 aa15.46■□□□□ 0.07
VPS18-203ENST00000558855 RCAN1P53805 252 aa15.46■□□□□ 0.07
VPS18-203ENST00000558855 MRPS6P82932 125 aaKnown RBP15.46■□□□□ 0.07
VPS18-203ENST00000558855 AP3B2Q13367 1082 aa15.46■□□□□ 0.07
VPS18-203ENST00000558855 TOB2Q14106 344 aaPredicted RBP15.46■□□□□ 0.07
VPS18-203ENST00000558855 CDHR5Q9HBB8 845 aa15.46■□□□□ 0.07
VPS18-203ENST00000558855 NCOR1O75376 2440 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 hCG_1984214I3L0E3 225 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 MAFGO15525 162 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 TAF2Q6P1X5 1199 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 BLOC1S2Q6QNY1 142 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 ABHD15Q6UXT9 468 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 CRIPAKQ8N1N5 446 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 ZNF713Q8N859 430 aaPredicted RBP15.45■□□□□ 0.06
VPS18-203ENST00000558855 LENG9Q96B70 501 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 YME1L1Q96TA2 773 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 ZMYND12Q9H0C1 365 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 CD320Q9NPF0 282 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 TRPC6Q9Y210 931 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 C5orf42Q9H799 3197 aa15.45■□□□□ 0.06
VPS18-203ENST00000558855 ESYT2A0FGR8 921 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 ENPP3O14638 875 aa15.44■□□□□ 0.06
VPS18-203ENST00000558855 PRPF3O43395 683 aaKnown RBP15.44■□□□□ 0.06
VPS18-203ENST00000558855 FOSP01100 380 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms