RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ZSWIM5Q9P217 1185 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 KCNH3Q9ULD8 1083 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 JAG2Q9Y219 1238 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 TIAM2Q8IVF5 1701 aa5.33□□□□□ -1.56
SPG11-211ENST00000558561 AOX1Q06278 1338 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 IRS2Q9Y4H2 1338 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 TRAF5O00463 557 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 GTF2F1P35269 517 aaKnown RBP eCLIP5.32□□□□□ -1.56
SPG11-211ENST00000558561 GMPSP49915 693 aaPredicted RBP5.32□□□□□ -1.56
SPG11-211ENST00000558561 CHRNDQ07001 517 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 KIAA2012Q0VF49 1180 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 LRP8Q14114 963 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 ALDH1L2Q3SY69 923 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 GNPTABQ3T906 1256 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 CCDC152Q4G0S7 254 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 ARTNQ5T4W7 220 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 NFXL1Q6ZNB6 911 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 ANKS3Q6ZW76 656 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 ANKRD18AQ8IVF6 992 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 PIWIL2Q8TC59 973 aaKnown RBP5.32□□□□□ -1.56
SPG11-211ENST00000558561 MICAL1Q8TDZ2 1067 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 BCL7CQ8WUZ0 217 aaPredicted RBP5.32□□□□□ -1.56
SPG11-211ENST00000558561 FRAT1Q92837 279 aaPredicted RBP5.32□□□□□ -1.56
SPG11-211ENST00000558561 UBE2FQ969M7 185 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 MEIS3Q99687 375 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 MKRN2Q9H000 416 aaKnown RBP5.32□□□□□ -1.56
SPG11-211ENST00000558561 ATP13A1Q9HD20 1204 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 CCDC39Q9UFE4 941 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 VAV3Q9UKW4 847 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 PA2G4Q9UQ80 394 aaKnown RBP5.32□□□□□ -1.56
SPG11-211ENST00000558561 SNX11Q9Y5W9 270 aa5.32□□□□□ -1.56
SPG11-211ENST00000558561 UTYO14607 1347 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 KDM2BQ8NHM5 1336 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 PITPNM2Q9BZ72 1349 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 SHISA3A0PJX4 238 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 ECE2O60344 883 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 ALDH1L1O75891 902 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 STK10O94804 968 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 UFL1O94874 794 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 PRNPP04156 253 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 TRIM27P14373 513 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 HSPA6P17066 643 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 EPHX2P34913 555 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 CCT4P50991 539 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 CLCN7P51798 805 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 SLC7A5Q01650 507 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 PRKCQQ04759 706 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 AUHQ13825 339 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 TNNI3KQ59H18 835 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 C20orf194Q5TEA3 1177 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 SOGA3Q5TF21 947 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 PRAMEF18Q5VWM3 479 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 LARP1BQ659C4 914 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 DCAF15Q66K64 600 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 ZNF574Q6ZN55 896 aaPredicted RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 TMC3Q7Z5M5 1100 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 NIM1KQ8IY84 436 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 CCDC144CPQ8IYA2 1237 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 TMEM57Q8N5G2 664 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 PANK1Q8TE04 598 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 HNRNPLLQ8WVV9 542 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 JDP2Q8WYK2 163 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 KLHL6Q8WZ60 621 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 HRASLS5Q96KN8 279 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 YTHDC1Q96MU7 727 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 PRDM14Q9GZV8 571 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 ACTR10Q9NZ32 417 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 CNOT7Q9UIV1 285 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 SLC5A6Q9Y289 635 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 RIPOR2Q9Y4F9 1068 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 LRRFIP2Q9Y608 721 aaKnown RBP5.31□□□□□ -1.56
SPG11-211ENST00000558561 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 WDR90Q96KV7 1748 aa5.31□□□□□ -1.56
SPG11-211ENST00000558561 ANKRD18BA2A2Z9 1011 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 KLF4O43474 513 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 VIL1P09327 827 aaKnown RBP5.3□□□□□ -1.56
SPG11-211ENST00000558561 CD8BP10966 210 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 SRFP11831 508 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 GYG1P46976 350 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 RABL6Q3YEC7 729 aaPredicted RBP5.3□□□□□ -1.56
SPG11-211ENST00000558561 TBC1D10BQ4KMP7 808 aaPredicted RBP5.3□□□□□ -1.56
SPG11-211ENST00000558561 CST9Q5W186 159 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 CIAPIN1Q6FI81 312 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 KIAA1211LQ6NV74 962 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 LDHAL6AQ6ZMR3 332 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 ATG9AQ7Z3C6 839 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 WFDC3Q8IUB2 231 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 C7orf61Q8IZ16 206 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 CNTROBQ8N137 903 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 GPC2Q8N158 579 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 CERS5Q8N5B7 392 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 CELF2-AS1Q8N7Q2 184 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 SREK1Q8WXA9 508 aaKnown RBP5.3□□□□□ -1.56
SPG11-211ENST00000558561 GLIS2Q9BZE0 524 aaPredicted RBP5.3□□□□□ -1.56
SPG11-211ENST00000558561 GPR62Q9BZJ7 368 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 ST7Q9NRC1 585 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 HACL1Q9UJ83 578 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 FBXL21Q9UKT6 434 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms