RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 EXOSC6Q5RKV6 272 aaKnown RBP8.06□□□□□ -1.12
TRPM1-206ENST00000558212 DIEXFQ68CQ4 756 aaKnown RBP8.06□□□□□ -1.12
TRPM1-206ENST00000558212 CDC42EP5Q6NZY7 148 aa8.06□□□□□ -1.12
TRPM1-206ENST00000558212 ZNF662Q6ZS27 426 aa8.06□□□□□ -1.12
TRPM1-206ENST00000558212 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
TRPM1-206ENST00000558212 RAPGEFL1Q9UHV5 662 aa8.06□□□□□ -1.12
TRPM1-206ENST00000558212 DAGLAQ9Y4D2 1042 aa8.06□□□□□ -1.12
TRPM1-206ENST00000558212 LTBP2Q14767 1821 aa8.06□□□□□ -1.12
TRPM1-206ENST00000558212 KIF16BQ96L93 1317 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 MYBBP1AQ9BQG0 1328 aaKnown RBP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 LOC285556D6RIA3 1793 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 SPDYE3A6NKU9 549 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 MEIS3P2A8K0S8 358 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 STK10O94804 968 aaKnown RBP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 IMPDH2P12268 514 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 ETFBP38117 255 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 PABPC4Q13310 644 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 PDE3AQ14432 1141 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 EPHA10Q5JZY3 1008 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 TREML2Q5T2D2 321 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
TRPM1-206ENST00000558212 PUS3Q9BZE2 481 aaKnown RBP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 TTYH1Q9H313 450 aaPredicted RBP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 LRRFIP2Q9Y608 721 aaKnown RBP8.05□□□□□ -1.12
TRPM1-206ENST00000558212 FRMPD3Q5JV73 1810 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 MYH13Q9UKX3 1938 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 GRM8O00222 908 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 APAF1O14727 1248 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 TMPRSS2O15393 492 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 KLF4O43474 513 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 ZKSCAN1P17029 563 aaPredicted RBP8.04□□□□□ -1.12
TRPM1-206ENST00000558212 NTF4P34130 210 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 ERVK-24P63145 666 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 CACNB2Q08289 660 aaPredicted RBP8.04□□□□□ -1.12
TRPM1-206ENST00000558212 SERINC3Q13530 473 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 TWISTNBQ3B726 338 aaPredicted RBP8.04□□□□□ -1.12
TRPM1-206ENST00000558212 BEND3Q5T5X7 828 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 WDR66Q8TBY9 1149 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 GSX1Q9H4S2 264 aaPredicted RBP8.04□□□□□ -1.12
TRPM1-206ENST00000558212 MORF4L1Q9UBU8 362 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 PRKAG3Q9UGI9 489 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 PCDHB14Q9Y5E9 798 aa8.04□□□□□ -1.12
TRPM1-206ENST00000558212 RFX7Q2KHR2 1363 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 TLDC2A0PJX2 215 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 ENTPD3O75355 529 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 TIAF1O95411 115 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 CYP2B6P20813 491 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 SHHQ15465 462 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 DUOXA2Q1HG44 320 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 METTL24Q5JXM2 366 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 CCDC81Q6ZN84 652 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 GK5Q6ZS86 529 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 HDXQ7Z353 690 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 ZFPM1Q8IX07 1006 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 TMEM130Q8N3G9 435 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 FAM169BQ8N8A8 192 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 VGLL2Q8N8G2 317 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 SMG8Q8ND04 991 aaKnown RBP8.03□□□□□ -1.12
TRPM1-206ENST00000558212 OR6P1Q8NGX9 317 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 TSR2Q969E8 191 aaKnown RBP8.03□□□□□ -1.12
TRPM1-206ENST00000558212 IDI2Q9BXS1 227 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 SENP6Q9GZR1 1112 aaPredicted RBP8.03□□□□□ -1.12
TRPM1-206ENST00000558212 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
TRPM1-206ENST00000558212 ASCC2Q9H1I8 757 aaPredicted RBP8.03□□□□□ -1.12
TRPM1-206ENST00000558212 USP40Q9NVE5 1235 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
TRPM1-206ENST00000558212 CRIM1Q9NZV1 1036 aa8.03□□□□□ -1.12
TRPM1-206ENST00000558212 PDE8BO95263 885 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 HTR3BO95264 441 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 IFIT1P09914 478 aaKnown RBP8.02□□□□□ -1.13
TRPM1-206ENST00000558212 SLFN14P0C7P3 912 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 CCND3P30281 292 aaPredicted RBP8.02□□□□□ -1.13
TRPM1-206ENST00000558212 MAPK4P31152 587 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 MCM4P33991 863 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 RGS3P49796 1198 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 ID3Q02535 119 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 MAP3K12Q12852 859 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 C9orf50Q5SZB4 431 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 Q6ZS46 218 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
TRPM1-206ENST00000558212 ATXN2LQ8WWM7 1075 aaKnown RBP8.02□□□□□ -1.13
TRPM1-206ENST00000558212 APBA2Q99767 749 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 RUSC1Q9BVN2 902 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 C9orf78Q9NZ63 289 aaPredicted RBP8.02□□□□□ -1.13
TRPM1-206ENST00000558212 PPP1R9AQ9ULJ8 1098 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 CORINQ9Y5Q5 1042 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 MRVI1Q9Y6F6 885 aa8.02□□□□□ -1.13
TRPM1-206ENST00000558212 DCDC2CA8MYV0 355 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 FAM229AH3BQW9 127 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 MSCO60682 206 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 ALDH1L1O75891 902 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 PRDX5P30044 214 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 RGS2P41220 211 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 HMGCS2P54868 508 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 RTP1P59025 263 aa8.01□□□□□ -1.13
TRPM1-206ENST00000558212 PUM3Q15397 648 aaKnown RBP8.01□□□□□ -1.13
TRPM1-206ENST00000558212 CKAP2LQ8IYA6 745 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms