RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.96□□□□□ -0.49
SEMA4B-204ENST00000558065 GUCA1BQ9UMX6 200 aa11.96□□□□□ -0.49
SEMA4B-204ENST00000558065 GLI1P08151 1106 aa11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 SUZ12Q15022 739 aaKnown RBP11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 CREG2Q8IUH2 290 aa11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 KRT23Q9C075 422 aa11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 GLT8D2Q9H1C3 349 aa11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 MTUS1Q9ULD2 1270 aa11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 GPC6Q9Y625 555 aaPredicted RBP11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.5
SEMA4B-204ENST00000558065 USP32Q8NFA0 1604 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 LINC00854A0A1B0GVQ3 168 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 PDE5AO76074 875 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 CDC27P30260 824 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 CTC1Q2NKJ3 1217 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 STK11IPQ8N1F8 1099 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 GGT7Q9UJ14 662 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 ZBED4O75132 1171 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 PBX1P40424 430 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 RASA2Q15283 850 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 ADRM1Q16186 407 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 PTTG2Q9NZH5 202 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 NUMBLQ9Y6R0 609 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 RASA4BC9J798 803 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 FAM47E-STBD1D6RA91 191 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 MATN2O00339 956 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 RASA4O43374 803 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 OAS1P00973 400 aaKnown RBP11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 CCNB1P14635 433 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 CARSP49589 748 aaKnown RBP11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 APLP1P51693 650 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 OCRLQ01968 901 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 ZC3H18Q86VM9 953 aaKnown RBP11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 IQCDQ96DY2 449 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 DPH5Q9H2P9 285 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
SEMA4B-204ENST00000558065 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 TEX33O43247 280 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PPARAQ07869 468 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 CYLC2Q14093 348 aaPredicted RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 MYLK3Q32MK0 819 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 MARK2Q7KZI7 788 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PPP1R14CQ8TAE6 165 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 CENPTQ96BT3 561 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 TCF12Q99081 682 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PRPF18Q99633 342 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 DDX23Q9BUQ8 820 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PNMA3Q9UL41 463 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 E9PBE3 544 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 CCDC159P0C7I6 412 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 UBTFL6P0CB48 400 aaPredicted RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 ZCCHC18P0CG32 403 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 SKIP12755 728 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 S100A5P33763 92 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PTH1RQ03431 593 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 DCTN2Q13561 401 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PRKG1Q13976 671 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 TOB2Q14106 344 aaPredicted RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 KPNB1Q14974 876 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 BOLA3Q53S33 107 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 APTXQ7Z2E3 356 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 BBS5Q8N3I7 341 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 RIN3Q8TB24 985 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 NRG4Q8WWG1 115 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 GSDMAQ96QA5 445 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 NUDCD1Q96RS6 583 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 MTFR1LQ9H019 292 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 GDF3Q9NR23 364 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 NFU1Q9UMS0 254 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 BMP6P22004 513 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 GTF2H1P32780 548 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PCSK7Q16549 785 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 GSTA3Q16772 222 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 ZBED8Q8IZ13 594 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 SPATA4Q8NEY3 305 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 CPLX3Q8WVH0 158 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 IFT74Q96LB3 600 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 PARVGQ9HBI0 331 aa11.94□□□□□ -0.5
SEMA4B-204ENST00000558065 IFT172Q9UG01 1749 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 GCOM1H8Y6P7 765 aaPredicted RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 SH3BP5O60239 455 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 B3GALNT1O75752 331 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 ZBED1O96006 694 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 MYZAPP0CAP1 466 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 TMED10P49755 219 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 BIRC3Q13489 604 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 TMTC4Q5T4D3 741 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 IL23RQ5VWK5 629 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms