RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PSMC6P62333 389 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 PDIA5Q14554 519 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 PDXDC2PQ6P474 469 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 KAT2BQ92831 832 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 PAWRQ96IZ0 340 aaKnown RBP23.9■■□□□ 1.42
CASC4-204ENST00000557945 KATNAL1Q9BW62 490 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 TUT1Q9H6E5 874 aaKnown RBP23.9■■□□□ 1.42
CASC4-204ENST00000557945 C11orf49Q9H6J7 331 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 STARD7Q9NQZ5 370 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 EMSYQ7Z589 1322 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 F2P00734 622 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 MARK3P27448 753 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 PSEN2P49810 448 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 MFSD10Q14728 455 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 NECAB2Q7Z6G3 386 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 CKAP2LQ8IYA6 745 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 IGSF22Q8N9C0 903 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 KRI1Q8N9T8 703 aaKnown RBP23.89■■□□□ 1.41
CASC4-204ENST00000557945 BANK1Q8NDB2 785 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 ERMNQ8TAM6 284 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 KCNG4Q8TDN1 519 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 EIF2AK1Q9BQI3 630 aaKnown RBP23.89■■□□□ 1.41
CASC4-204ENST00000557945 ERAP1Q9NZ08 941 aa23.89■■□□□ 1.41
CASC4-204ENST00000557945 FBXO2Q9UK22 296 aaPredicted RBP23.89■■□□□ 1.41
CASC4-204ENST00000557945 SRPRBQ9Y5M8 271 aaKnown RBP23.89■■□□□ 1.41
CASC4-204ENST00000557945 CYP4A11Q02928 519 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 GRIN1Q05586 938 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 KIAA0753Q2KHM9 967 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 PLPPR4Q7Z2D5 763 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 DYDC2Q96IM9 177 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 SPATA32Q96LK8 384 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 RGL1Q9NZL6 768 aa23.88■■□□□ 1.41
CASC4-204ENST00000557945 MORC2Q9Y6X9 1032 aaPredicted RBP23.88■■□□□ 1.41
CASC4-204ENST00000557945 PP2D1A8MPX8 630 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 PPP6R2O75170 966 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 P4HBP07237 508 aaKnown RBP23.87■■□□□ 1.41
CASC4-204ENST00000557945 UGCGQ16739 394 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 TRMT1LQ7Z2T5 733 aaKnown RBP23.87■■□□□ 1.41
CASC4-204ENST00000557945 AFAP1L1Q8TED9 768 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 PPP1R13LQ8WUF5 828 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 ATP6V0A1Q93050 837 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 CLIC6Q96NY7 704 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 RCOR1Q9UKL0 485 aa23.87■■□□□ 1.41
CASC4-204ENST00000557945 COL6A1P12109 1028 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 CDC25AP30304 524 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 LONP1P36776 959 aaKnown RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 QARSP47897 775 aaKnown RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 ME1P48163 572 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 SLC26A2P50443 739 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 PSMC5P62195 406 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 ITGA7Q13683 1181 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 CTTNQ14247 550 aaKnown RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 NBPF20Q3BBV1 942 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 KRT79Q5XKE5 535 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 TPH2Q8IWU9 490 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 NEK9Q8TD19 979 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 SNX29Q8TEQ0 813 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 LEO1Q8WVC0 666 aaPredicted RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 TNPO1Q92973 898 aaKnown RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 SCAND2PQ9GZW5 306 aaPredicted RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 CSRNP2Q9H175 543 aa23.86■■□□□ 1.41
CASC4-204ENST00000557945 MAFBQ9Y5Q3 323 aaPredicted RBP23.86■■□□□ 1.41
CASC4-204ENST00000557945 IGSF9BQ9UPX0 1349 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 A0A0U1RQG5 324 aaPredicted RBP23.85■■□□□ 1.41
CASC4-204ENST00000557945 CCT6AP40227 531 aaKnown RBP23.85■■□□□ 1.41
CASC4-204ENST00000557945 ATN1P54259 1190 aaPredicted RBP23.85■■□□□ 1.41
CASC4-204ENST00000557945 FAM47CQ5HY64 1035 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 HAUS3Q68CZ6 603 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 AK8Q96MA6 479 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 LXNQ9BS40 222 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 RNPEPQ9H4A4 650 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 GDPD2Q9HCC8 539 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 TRPC6Q9Y210 931 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 STK24Q9Y6E0 443 aa23.85■■□□□ 1.41
CASC4-204ENST00000557945 HAS3O00219 553 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 DKC1O60832 514 aaKnown RBP eCLIP23.84■■□□□ 1.41
CASC4-204ENST00000557945 SLITRK3O94933 977 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 PRKCEQ02156 737 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 PLCB4Q15147 1175 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 ZRSR1Q15695 479 aaKnown RBP23.84■■□□□ 1.41
CASC4-204ENST00000557945 C7orf31Q8N865 590 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 HSD17B14Q9BPX1 270 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 ZSWIM4Q9H7M6 989 aa23.84■■□□□ 1.41
CASC4-204ENST00000557945 POTEB3A0JP26 581 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 ZNF862O60290 1169 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 MED24O75448 989 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 ATP4AP20648 1035 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 UBA7P41226 1012 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 SPECC1Q5M775 1068 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 POTEBQ6S5H4 581 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 CATSPER3Q86XQ3 398 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 POLR3CQ9BUI4 534 aaPredicted RBP23.83■■□□□ 1.41
CASC4-204ENST00000557945 TUFT1Q9NNX1 390 aa23.83■■□□□ 1.41
CASC4-204ENST00000557945 GRIN2DO15399 1336 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 CUTAO60888 179 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 OATP04181 439 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 SPATA31C1P0DKV0 1188 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 RPA1P27694 616 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 SLC39A5Q6ZMH5 540 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 UBE2Q1Q7Z7E8 422 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms