RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 UTP14CQ5TAP6 766 aaKnown RBP13.8□□□□□ -0.2
RCCD1-209ENST00000557750 TMEM60Q9H2L4 133 aa13.8□□□□□ -0.2
RCCD1-209ENST00000557750 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
RCCD1-209ENST00000557750 ELP1O95163 1332 aa13.8□□□□□ -0.2
RCCD1-209ENST00000557750 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
RCCD1-209ENST00000557750 CABYRO75952 493 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 F13A1P00488 732 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 RAG1P15918 1043 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 TXKP42681 527 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 PTGDRQ13258 359 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 SMAP1Q8IYB5 467 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 MTMR9Q96QG7 549 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 UNC45AQ9H3U1 944 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 GSTTP1A0A1W2PQM5 241 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 WDR64B1ANS9 1081 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 BACH1O14867 736 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 LGALS2P05162 132 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 HOXD8P13378 290 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 MIS18BP1Q6P0N0 1132 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 TRIM50Q86XT4 487 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 GLG1Q92896 1179 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 AZI2Q9H6S1 392 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 TTC12Q9H892 705 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-209ENST00000557750 PRDM6Q9NQX0 595 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 PCDHA12Q9UN75 941 aa13.79□□□□□ -0.2
RCCD1-209ENST00000557750 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 BRD1O95696 1058 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 SFNP31947 248 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 JAK3P52333 1124 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 PSMC6P62333 389 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 FPGSQ05932 587 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 FAAP100Q0VG06 881 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 GRIN2CQ14957 1233 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 MIER3Q7Z3K6 550 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 VAV3Q9UKW4 847 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 ZNF215Q9UL58 517 aaPredicted RBP13.78□□□□□ -0.2
RCCD1-209ENST00000557750 CEP131Q9UPN4 1083 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 PCDHA10Q9Y5I2 948 aa13.78□□□□□ -0.2
RCCD1-209ENST00000557750 H3BRB1 525 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 LAD1O00515 517 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 F2P00734 622 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 PSAPP07602 524 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
RCCD1-209ENST00000557750 PPP2R5CQ13362 524 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 SF3A1Q15459 793 aaKnown RBP13.77□□□□□ -0.21
RCCD1-209ENST00000557750 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 ABHD15Q6UXT9 468 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.21
RCCD1-209ENST00000557750 FTOQ9C0B1 505 aaKnown RBP eCLIP13.77□□□□□ -0.21
RCCD1-209ENST00000557750 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
RCCD1-209ENST00000557750 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
RCCD1-209ENST00000557750 ATG7O95352 703 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 BMP15O95972 392 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 MARK3P27448 753 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 TECP42680 631 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 STAT5BP51692 787 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 NUCB2P80303 420 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 ITGA7Q13683 1181 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 MFSD10Q14728 455 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 KIAA0753Q2KHM9 967 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 TMEM266Q2M3C6 531 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 SWSAP1Q6NVH7 229 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 KAT2BQ92831 832 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
RCCD1-209ENST00000557750 SMARCAD1Q9H4L7 1026 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 ZNF302Q9NR11 478 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 CLIC4Q9Y696 253 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 EMSYQ7Z589 1322 aa13.76□□□□□ -0.21
RCCD1-209ENST00000557750 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
RCCD1-209ENST00000557750 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
RCCD1-209ENST00000557750 LGR5O75473 907 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 DNAJB2P25686 324 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 PSEN2P49810 448 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
RCCD1-209ENST00000557750 FAM47CQ5HY64 1035 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 B3GNT9Q6UX72 402 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 DTHD1Q6ZMT9 781 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 CCDC60Q8IWA6 550 aaPredicted RBP13.75□□□□□ -0.21
RCCD1-209ENST00000557750 RDM1Q8NG50 284 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 PPP1R13LQ8WUF5 828 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
RCCD1-209ENST00000557750 TOX2Q96NM4 488 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 PCYT2Q99447 389 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms