RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 RUBCNQ92622 972 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 GPKOWQ92917 476 aaPredicted RBP eCLIP11.72□□□□□ -0.532e-6■■■■■ 39.1
ABCD4-227ENST00000557554 RTP3Q9BQQ7 232 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
ABCD4-227ENST00000557554 OPLAHO14841 1288 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 FGF18O76093 207 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 HSPD1P10809 573 aaKnown RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 ATXN1P54253 815 aaKnown RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 GHRHRQ02643 423 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 PAN2Q504Q3 1202 aaKnown RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 STOX1Q6ZVD7 989 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 NECTIN4Q96NY8 510 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 PDCD2LQ9BRP1 358 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 NAPBQ9H115 298 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 TELO2Q9Y4R8 837 aa11.71□□□□□ -0.53
ABCD4-227ENST00000557554 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.53
ABCD4-227ENST00000557554 CACNA1IQ9P0X4 2223 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 ABCB11O95342 1321 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 HIDE1A8MVS5 230 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 HSD17B4P51659 736 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 ITIH3Q06033 890 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 TSHZ1Q6ZSZ6 1077 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 ERVK-5Q9HDB9 667 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 TMEM260Q9NX78 707 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 PCDHB12Q9Y5F1 795 aa11.7□□□□□ -0.54
ABCD4-227ENST00000557554 NRCAMQ92823 1304 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 GOLGA8HP0CJ92 632 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 SRGAP2BP0DMP2 458 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 CD52P31358 61 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 LLGL2Q6P1M3 1020 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 TAF2Q6P1X5 1199 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 TTC14Q96N46 770 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 GPR20Q99678 358 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 AAASQ9NRG9 546 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 ECHDC1Q9NTX5 307 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 LZTS1Q9Y250 596 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 USTQ9Y2C2 406 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 SQORQ9Y6N5 450 aa11.69□□□□□ -0.54
ABCD4-227ENST00000557554 MBLAC1A4D2B0 266 aaPredicted RBP11.68□□□□□ -0.54
ABCD4-227ENST00000557554 STAG3L1P0CL83 205 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 MYCLP12524 364 aaPredicted RBP11.68□□□□□ -0.54
ABCD4-227ENST00000557554 APOBRQ0VD83 1088 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 PGM5Q15124 567 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
ABCD4-227ENST00000557554 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 MARCH8Q5T0T0 291 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 GPATCH4Q5T3I0 446 aaKnown RBP11.68□□□□□ -0.54
ABCD4-227ENST00000557554 CES5AQ6NT32 575 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 TRIM50Q86XT4 487 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 ADGRF4Q8IZF3 695 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 IL31RAQ8NI17 732 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
ABCD4-227ENST00000557554 FTHL17Q9BXU8 183 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 CDY2AQ9Y6F7 541 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 DOCK5Q9H7D0 1870 aa11.68□□□□□ -0.54
ABCD4-227ENST00000557554 FASNP49327 2511 aaKnown RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 FAM208BQ5VWN6 2430 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 HMMRO75330 724 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 ADRB1P08588 477 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 WEE2P0C1S8 567 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 SP9P0CG40 484 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 SCG2P13521 617 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 SDHBP21912 280 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 MTHFRP42898 656 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 TDGQ13569 410 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 ZMYM1Q5SVZ6 1142 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 KIAA0319Q5VV43 1072 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 SIX5Q8N196 739 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 FEZF2Q8TBJ5 459 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 CWH43Q9H720 699 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 NGRNQ9NPE2 291 aaKnown RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 DLGAP2Q9P1A6 1054 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 PADI3Q9ULW8 664 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
ABCD4-227ENST00000557554 HCFC2Q9Y5Z7 792 aa11.67□□□□□ -0.54
ABCD4-227ENST00000557554 MYH6P13533 1939 aa11.66□□□□□ -0.54
ABCD4-227ENST00000557554 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
ABCD4-227ENST00000557554 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms