RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 FIBCD1Q8N539 461 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 GLG1Q92896 1179 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
VRTN-202ENST00000557177 FAM122AQ96E09 287 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 PCYT2Q99447 389 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
VRTN-202ENST00000557177 PKD2L1Q9P0L9 805 aa16.53■□□□□ 0.24
VRTN-202ENST00000557177 ARIH1Q9Y4X5 557 aaPredicted RBP16.53■□□□□ 0.24
VRTN-202ENST00000557177 ENPP3O14638 875 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 RB1P06400 928 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 CTNNB1P35222 781 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 TSHZ1Q6ZSZ6 1077 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 HEATR3Q7Z4Q2 680 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 MICU3Q86XE3 530 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 GJD3Q8N144 294 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 CLP1Q92989 425 aaKnown RBP16.52■□□□□ 0.24
VRTN-202ENST00000557177 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
VRTN-202ENST00000557177 JPH1Q9HDC5 661 aaPredicted RBP16.52■□□□□ 0.24
VRTN-202ENST00000557177 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
VRTN-202ENST00000557177 CNTNAP5Q8WYK1 1306 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 H3BQ06 376 aaPredicted RBP16.51■□□□□ 0.23
VRTN-202ENST00000557177 RPLP2P05387 115 aaKnown RBP16.51■□□□□ 0.23
VRTN-202ENST00000557177 BMPR1AP36894 532 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 MRPS6P82932 125 aaKnown RBP16.51■□□□□ 0.23
VRTN-202ENST00000557177 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 LINC01599Q8WXQ3 324 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 C11orf84Q9BUA3 381 aaPredicted RBP16.51■□□□□ 0.23
VRTN-202ENST00000557177 AGO3Q9H9G7 860 aaKnown RBP16.51■□□□□ 0.23
VRTN-202ENST00000557177 KCNH7Q9NS40 1196 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 SLC9A2Q9UBY0 812 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 HCN4Q9Y3Q4 1203 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 RWDD3Q9Y3V2 267 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 KIAA1671Q9BY89 1806 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 LOXHD1Q8IVV2 1947 aa16.51■□□□□ 0.23
VRTN-202ENST00000557177 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 NFASCO94856 1347 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 FAM86C2PA6NEL3 165 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 RRN3P2A6NIE6 340 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 INSRRP14616 1297 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 IGBP1P78318 339 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 CRIPAKQ8N1N5 446 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 CYP2W1Q8TAV3 490 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 LMAN2LQ9H0V9 348 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 ANO2Q9NQ90 1003 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
VRTN-202ENST00000557177 GRM6O15303 877 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 DGKIO75912 1065 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 TRIOO75962 3097 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 CD52P31358 61 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 LTBRP36941 435 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 FUT2Q10981 343 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 CTC1Q2NKJ3 1217 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 PLPPR4Q7Z2D5 763 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 FAM49AQ9H0Q0 323 aaPredicted RBP16.49■□□□□ 0.23
VRTN-202ENST00000557177 AZI2Q9H6S1 392 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 RIC8AQ9NPQ8 531 aa16.49■□□□□ 0.23
VRTN-202ENST00000557177 RBM28Q9NW13 759 aaKnown RBP16.49■□□□□ 0.23
VRTN-202ENST00000557177 POTEB3A0JP26 581 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 NCK2O43639 380 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 ARP10275 920 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 SSTR3P32745 418 aaPredicted RBP16.48■□□□□ 0.23
VRTN-202ENST00000557177 ACTR2P61160 394 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 ITGB3BPQ13352 177 aaPredicted RBP16.48■□□□□ 0.23
VRTN-202ENST00000557177 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
VRTN-202ENST00000557177 PLCB4Q15147 1175 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 IER5Q5VY09 327 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 POTEBQ6S5H4 581 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 RTN4RL1Q86UN2 441 aaPredicted RBP16.48■□□□□ 0.23
VRTN-202ENST00000557177 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 CLDND1Q9NY35 253 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 TRPC6Q9Y210 931 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 PCDHA2Q9Y5H9 948 aa16.48■□□□□ 0.23
VRTN-202ENST00000557177 IGSF9BQ9UPX0 1349 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 STXBP3O00186 592 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 ATG7O95352 703 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 FOSP01100 380 aaPredicted RBP16.47■□□□□ 0.23
VRTN-202ENST00000557177 MMP1P03956 469 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 NAPAP54920 295 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
VRTN-202ENST00000557177 ZP2Q05996 745 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 HYAL1Q12794 435 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 TNPO1Q92973 898 aaKnown RBP16.47■□□□□ 0.23
VRTN-202ENST00000557177 SDF4Q9BRK5 362 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 AGO4Q9HCK5 861 aaKnown RBP16.47■□□□□ 0.23
VRTN-202ENST00000557177 PRKAG3Q9UGI9 489 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms