RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 FRMD4BQ9Y2L6 1034 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 CACNA1SQ13698 1873 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 PSMD14O00487 310 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 MSH4O15457 936 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 PACSIN1Q9BY11 444 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 GLIS2Q9BZE0 524 aaPredicted RBP16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 SF3A3Q12874 501 aaKnown RBP eCLIP16.83■□□□□ 0.282e-7■□□□□ 10.4
TMEM55B-207ENST00000557041 NIM1KQ8IY84 436 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 FUT8Q9BYC5 575 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 ADAM21Q9UKJ8 722 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 SUGT1Q9Y2Z0 365 aa16.83■□□□□ 0.28
TMEM55B-207ENST00000557041 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 GOLGA8IPA6NC78 632 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 GOLGA8JA6NMD2 632 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 FOSP01100 380 aaPredicted RBP16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 JAG1P78504 1218 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 PSMD2Q13200 908 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 WDR78Q5VTH9 848 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 KCTD16Q68DU8 428 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 KRT12Q99456 494 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 LRRC1Q9BTT6 524 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 NYAP2Q9P242 653 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 FZD1Q9UP38 647 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 EML1O00423 815 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 MEIS2O14770 477 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 GUCY2DQ02846 1103 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 MIER3Q7Z3K6 550 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 FLAD1Q8NFF5 587 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 JRKLQ9Y4A0 524 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 IRS2Q9Y4H2 1338 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 K7ENM7 598 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 AFPP02771 609 aaKnown RBP16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 USP11P51784 963 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 KNOP1Q1ED39 458 aaKnown RBP16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 ODF2Q5BJF6 829 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 FAM186BQ8IYM0 893 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 ELMO3Q96BJ8 720 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 ERGIC2Q96RQ1 377 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
TMEM55B-207ENST00000557041 ABCA3Q99758 1704 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 NR3C1P04150 777 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 KRT13P13646 458 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 SSR1P43307 286 aaKnown RBP16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 TUBB2AQ13885 445 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 HOOK2Q96ED9 719 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 BICD1Q96G01 975 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 TUBB2BQ9BVA1 445 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 AP1M1Q9BXS5 423 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 ROBO3Q96MS0 1386 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 H3BQF6 201 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 PDE2AO00408 941 aaPredicted RBP16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 ZEB2O60315 1214 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 HARSP12081 509 aaKnown RBP16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 RXRBP28702 533 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 PDXDC1Q6P996 788 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 DEFB132Q7Z7B7 95 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 HDAC7Q8WUI4 952 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 DNAJC19Q96DA6 116 aa16.81■□□□□ 0.28
TMEM55B-207ENST00000557041 A0A087X0T9 212 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 ZNF263O14978 683 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 FAM228BP0C875 321 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 DAAM2Q86T65 1068 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 ANKRD36CQ5JPF3 1778 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 NT5C2P49902 561 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 RPS6KA1Q15418 735 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 OSBPL9Q96SU4 736 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 FAM204AQ9H8W3 233 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 CHD4Q14839 1912 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 GOLGA6BA6NDN3 693 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 RGL2O15211 777 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 MCM3P25205 808 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 KLRC1P26715 233 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 COG2Q14746 738 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 CFAP221Q4G0U5 840 aa16.8■□□□□ 0.28
TMEM55B-207ENST00000557041 NBPF9Q3BBW0 867 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 FAM102BQ5T8I3 360 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 PHLDB2Q86SQ0 1253 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 EPB41L5Q9HCM4 733 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 SMIM23A6NLE4 172 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 BACH1O14867 736 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 GNA14O95837 355 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 ARP10275 920 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms