RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
SRP54-213ENST00000556994 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
SRP54-213ENST00000556994 BCAS3Q9H6U6 928 aa12.47□□□□□ -0.41
SRP54-213ENST00000556994 PLCB1Q9NQ66 1216 aa12.47□□□□□ -0.41
SRP54-213ENST00000556994 NARFQ9UHQ1 456 aa12.47□□□□□ -0.41
SRP54-213ENST00000556994 NFS1Q9Y697 457 aa12.47□□□□□ -0.41
SRP54-213ENST00000556994 GPR75-ASB3A0A0A6YYF3 556 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 CETN3O15182 167 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 DAPK3O43293 454 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 RAD21O60216 631 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 FSBPO95073 299 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 GNA14O95837 355 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 SLURP2P0DP57 97 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 UCHL3P15374 230 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 CYP11B2P19099 503 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP11P51784 963 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 RHBDL3P58872 404 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 SF3B2Q13435 895 aaKnown RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 ARSHQ5FYA8 562 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 EMC10Q5UCC4 262 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 ALKBH5Q6P6C2 394 aaKnown RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 GJB7Q6PEY0 223 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 KCTD1Q719H9 257 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 CELF4Q9BZC1 486 aaKnown RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 NAGPAQ9UK23 515 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 FBXL5Q9UKA1 691 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 NOC2LQ9Y3T9 749 aaKnown RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 POTEFA5A3E0 1075 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 DCDC2CA8MYV0 355 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 MEIS1O00470 390 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 KRIT1O00522 736 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 MED24O75448 989 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 FAM107AO95990 144 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 QPCTQ16769 361 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 DCAF17Q5H9S7 520 aaPredicted RBP12.46□□□□□ -0.41
SRP54-213ENST00000556994 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 MICALCLQ6ZW33 695 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 LRRC57Q8N9N7 239 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 LEMD3Q9Y2U8 911 aa12.46□□□□□ -0.41
SRP54-213ENST00000556994 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 LOC102724159A0A0B4J2E5 919 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 USP17L10C9JJH3 530 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 TTI1O43156 1089 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 PSMC6P62333 389 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 SEPT2Q15019 361 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 PWP2Q15269 919 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 DPY19L2P1Q6NXN4 242 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 FOXR2Q6PJQ5 311 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 CUL5Q93034 780 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 CYFIP2Q96F07 1278 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 CABS1Q96KC9 395 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 DPH5Q9H2P9 285 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 CNOT8Q9UFF9 292 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 NOVA2Q9UNW9 492 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 PGRMC1O00264 195 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 PON1P27169 355 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 RFC4P35249 363 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 CLK2P49760 499 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 GPSM2P81274 684 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 EXOC3L4Q17RC7 722 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 SPRED3Q2MJR0 410 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 PEX26Q7Z412 305 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 TPCN2Q8NHX9 752 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 ACTRT1Q8TDG2 376 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 PBKQ96KB5 322 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 NT5C3AQ9H0P0 336 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 YY1AP1Q9H869 796 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 CD248Q9HCU0 757 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 ARMCX3Q9UH62 379 aaPredicted RBP12.45□□□□□ -0.42
SRP54-213ENST00000556994 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
SRP54-213ENST00000556994 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
SRP54-213ENST00000556994 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
SRP54-213ENST00000556994 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
SRP54-213ENST00000556994 SF3A3Q12874 501 aaKnown RBP eCLIP12.44□□□□□ -0.422e-10■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms