RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 A0A1W2PQY0 241 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 RGS12O14924 1447 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 GSTM1P09488 218 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 RGPD1P0DJD0 1748 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 TACR1P25103 407 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 BMP8BP34820 402 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 EIF4A3P38919 411 aaKnown RBP5.44□□□□□ -1.54
SRP54-212ENST00000556992 MC3RP41968 323 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 SLC39A6Q13433 755 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 PWP1Q13610 501 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 BECN1Q14457 450 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 NT5DC1Q5TFE4 455 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 TDRD10Q5VZ19 366 aaKnown RBP5.44□□□□□ -1.54
SRP54-212ENST00000556992 CASC1Q6TDU7 716 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 DNAJC14Q6Y2X3 702 aaPredicted RBP5.44□□□□□ -1.54
SRP54-212ENST00000556992 COPS6Q7L5N1 327 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 SSH3Q8TE77 659 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 LRRCC1Q9C099 1032 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 BCAS3Q9H6U6 928 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 RXFP1Q9HBX9 757 aa5.44□□□□□ -1.54
SRP54-212ENST00000556992 LRRFIP2Q9Y608 721 aaKnown RBP5.44□□□□□ -1.54
SRP54-212ENST00000556992 MAP2P11137 1827 aaKnown RBP5.44□□□□□ -1.54
SRP54-212ENST00000556992 USP54Q70EL1 1684 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 ABCC6O95255 1503 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 IBTKQ9P2D0 1353 aaPredicted RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 C9IYK1 514 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 CDC45O75419 566 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 SURF6O75683 361 aaKnown RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 ATE1O95260 518 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 STARD3NLO95772 234 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 ATF2P15336 505 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 MCM4P33991 863 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 TMEM62Q0P6H9 643 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 AIMP1Q12904 312 aaKnown RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 MTX1Q13505 466 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 CBX2Q14781 532 aaPredicted RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 PROSER3Q2NL68 480 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 SPATS1Q496A3 300 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 HHIPL2Q6UWX4 724 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 ERMP1Q7Z2K6 904 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 PPP1R42Q7Z4L9 355 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 C16orf71Q8IYS4 520 aaPredicted RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 NAT16Q8N8M0 369 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 ZNF526Q8TF50 670 aaPredicted RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 ZNF296Q8WUU4 475 aaPredicted RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 ANP32EQ9BTT0 268 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 DSCC1Q9BVC3 393 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 LRRC3Q9BY71 257 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 FAM86C1Q9NVL1 165 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 TMOD3Q9NYL9 352 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 THRAP3Q9Y2W1 955 aaKnown RBP5.43□□□□□ -1.54
SRP54-212ENST00000556992 USP16Q9Y5T5 823 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 UTYO14607 1347 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 SPATA31A6Q5VVP1 1343 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 IRS2Q9Y4H2 1338 aa5.43□□□□□ -1.54
SRP54-212ENST00000556992 ATP10DQ9P241 1426 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 A0A1W2PQ27 194 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 A0A1W2PQ64 194 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 A0A1W2PQC6 194 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 A0A1W2PQD8 194 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 PRAMEF22A3QJZ6 481 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 H0Y8X5 98 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 GRM8O00222 908 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 SHOXO15266 292 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 SRGAP3O43295 1099 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 GREM1O60565 184 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 ANXA1P04083 346 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 DBHP09172 617 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 NBPF7P0C2Y1 421 aaPredicted RBP5.42□□□□□ -1.54
SRP54-212ENST00000556992 MYL6BP14649 208 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 NME1P15531 152 aaKnown RBP5.42□□□□□ -1.54
SRP54-212ENST00000556992 MAPKAPK2P49137 400 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 FOXO4P98177 505 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 AUHQ13825 339 aaKnown RBP5.42□□□□□ -1.54
SRP54-212ENST00000556992 GCKRQ14397 625 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 TTC22Q5TAA0 569 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 BICRALQ6AI39 1079 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 SND1Q7KZF4 910 aaKnown RBP eCLIP5.42□□□□□ -1.54
SRP54-212ENST00000556992 ERC1Q8IUD2 1116 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 PLBD2Q8NHP8 589 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 FNIP1Q8TF40 1166 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
SRP54-212ENST00000556992 KIF1BPQ96EK5 621 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 SLC9A7Q96T83 725 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 C22orf23Q9BZE7 217 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 USP40Q9NVE5 1235 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 USP35Q9P2H5 1018 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 STAP2Q9UGK3 403 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 ADAMTS1Q9UHI8 967 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 DUSP10Q9Y6W6 482 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 ADCY9O60503 1353 aa5.42□□□□□ -1.54
SRP54-212ENST00000556992 PNMA6EA0A0J9YXQ4 647 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 SMARCA5O60264 1052 aaPredicted RBP5.41□□□□□ -1.54
SRP54-212ENST00000556992 PFKLP17858 780 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 PDE1AP54750 535 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 RAD51AP2Q09MP3 1159 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 G3BP1Q13283 466 aaKnown RBP eCLIP5.41□□□□□ -1.54
SRP54-212ENST00000556992 OS9Q13438 667 aaPredicted RBP5.41□□□□□ -1.54
SRP54-212ENST00000556992 LIPIQ6XZB0 460 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms