RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ACTR2P61160 394 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 ADAM17P78536 824 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 FUT2Q10981 343 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 TAF2Q6P1X5 1199 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 PLA2G4DQ86XP0 818 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 APBB2Q92870 758 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 PHKBQ93100 1093 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 SLC26A6Q9BXS9 759 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 OSBPL7Q9BZF2 842 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 FAM49AQ9H0Q0 323 aaPredicted RBP12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 TCEAL9Q9UHQ7 104 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 NLRC5Q86WI3 1866 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 NFASCO94856 1347 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 RRN3P2A6NIE6 340 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 CHRNA1P02708 482 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 INSRRP14616 1297 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 GNA11P29992 359 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 SREBF1P36956 1147 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 CLK2P49760 499 aaKnown RBP12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 AAK1Q2M2I8 961 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 TRMT1LQ7Z2T5 733 aaKnown RBP12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 KCNB2Q92953 911 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 ZBTB10Q96DT7 871 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 CDY2AQ9Y6F7 541 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 PRUNE2Q8WUY3 3088 aa12.04□□□□□ -0.48
SPTLC2-205ENST00000556607 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 MEIS1O00470 390 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 ERVK-21P61565 698 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 TFF2Q03403 129 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 TMEM62Q0P6H9 643 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 ITGB3BPQ13352 177 aaPredicted RBP12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 PLCB4Q15147 1175 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 IER5Q5VY09 327 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 FAM160B1Q5W0V3 765 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 CKAP2LQ8IYA6 745 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 REXO1Q8N1G1 1221 aaKnown RBP12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 ADAMTS19Q8TE59 1207 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 TRAPPC12Q8WVT3 735 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 TOP1MTQ969P6 601 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 PCYT2Q99447 389 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 ZNF577Q9BSK1 485 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 SUGCTQ9HAC7 445 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 SAMM50Q9Y512 469 aa12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
SPTLC2-205ENST00000556607 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 CPLX1O14810 134 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 NLRP5P59047 1200 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 MRPS6P82932 125 aaKnown RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 PKN1Q16512 942 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 RUFY3Q7L099 469 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 TRIM22Q8IYM9 498 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 CCDC148Q8NFR7 591 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 BICD2Q8TD16 824 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 HLA-CQ95604 372 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 UHRF1Q96T88 793 aaPredicted RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 ZMYND12Q9H0C1 365 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 NCOA5Q9HCD5 579 aaKnown RBP12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 ZNF302Q9NR11 478 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 VPS54Q9P1Q0 977 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 GINS2Q9Y248 185 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
SPTLC2-205ENST00000556607 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 MBLAC1A4D2B0 266 aaPredicted RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 LPXNO60711 386 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 RPLP2P05387 115 aaKnown RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 KLRC1P26715 233 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 KCNQ1P51787 676 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 SETQ01105 290 aaPredicted RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 MGAT3Q09327 533 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 STK3Q13188 491 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 LPIN1Q14693 890 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 PRR16Q569H4 304 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 FBXO47Q5MNV8 452 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 SWSAP1Q6NVH7 229 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 MIS18BP1Q6P0N0 1132 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 PDXDC2PQ6P474 469 aa12.01□□□□□ -0.49
SPTLC2-205ENST00000556607 TSHZ1Q6ZSZ6 1077 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms