RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 A0A0G2JMZ2 1700 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 ZBED4O75132 1171 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 GNAI2P04899 355 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 IQCF3P0C7M6 154 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 RASA1P20936 1047 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 ERVK-21P61565 698 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 SLFN5Q08AF3 891 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 HIF1AQ16665 826 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 IQSEC1Q6DN90 963 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 CPXCR1Q8N123 301 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
ATXN3-236ENST00000556220 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 NEK9Q8TD19 979 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 GLMNQ92990 594 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 SUSD3Q96L08 255 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 FTOQ9C0B1 505 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATXN3-236ENST00000556220 TFIP11Q9UBB9 837 aaKnown RBP8.23□□□□□ -1.09
ATXN3-236ENST00000556220 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 DBNLQ9UJU6 430 aaKnown RBP8.23□□□□□ -1.09
ATXN3-236ENST00000556220 MYO15AQ9UKN7 3530 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 TNKSO95271 1327 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 TRIOO75962 3097 aa8.23□□□□□ -1.09
ATXN3-236ENST00000556220 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 GBF1Q92538 1859 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 CDK5RAP2Q96SN8 1893 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 LCHNA4D1U4 455 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 ASB14A6NK59 587 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 BAIAP3O94812 1187 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 PTGS1P23219 599 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 CDK8P49336 464 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 SEC13P55735 322 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 ALDH16A1Q8IZ83 802 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 RETREG2Q8NC44 543 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 SDR42E1Q8WUS8 393 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 HSH2DQ96JZ2 352 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 TGS1Q96RS0 853 aaKnown RBP8.22□□□□□ -1.09
ATXN3-236ENST00000556220 C2orf49Q9BVC5 232 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-236ENST00000556220 CCDC8Q9H0W5 538 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-236ENST00000556220 SLC38A10Q9HBR0 1119 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 RAVER2Q9HCJ3 691 aaKnown RBP8.22□□□□□ -1.09
ATXN3-236ENST00000556220 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 MYH1P12882 1939 aa8.22□□□□□ -1.09
ATXN3-236ENST00000556220 M0R082 166 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 KCNJ6P48051 423 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 ZP2Q05996 745 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 TYRO3Q06418 890 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 OS9Q13438 667 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 PRRT3Q5FWE3 981 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 SLC9C2Q5TAH2 1124 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 TAPT1Q6NXT6 567 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 FAM9BQ8IZU0 186 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 PRSS33Q8NF86 280 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 ZNF417Q8TAU3 575 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 CLUAP1Q96AJ1 413 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 ZNF587Q96SQ5 575 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 RAD9AQ99638 391 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 UPF3BQ9BZI7 483 aaKnown RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 PDGFCQ9NRA1 345 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 CTDP1Q9Y5B0 961 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 MAFBQ9Y5Q3 323 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-236ENST00000556220 FAM186AA6NE01 2351 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 TECTAO75443 2155 aa8.21□□□□□ -1.1
ATXN3-236ENST00000556220 C5orf42Q9H799 3197 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 MYO7AQ13402 2215 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 USP17L21D6R901 530 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 F5H6K3 240 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 H3BQ06 376 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-236ENST00000556220 SURF6O75683 361 aaKnown RBP8.2□□□□□ -1.1
ATXN3-236ENST00000556220 NDUFB10O96000 172 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 CT47B1P0C2W7 299 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-236ENST00000556220 PDE6AP16499 860 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 ADH7P40394 386 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 OAZ1P54368 228 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 WDR5P61964 334 aaKnown RBP8.2□□□□□ -1.1
ATXN3-236ENST00000556220 KLRC3Q07444 240 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 TMEM132AQ24JP5 1023 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 TMEM63BQ5T3F8 832 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 C12orf60Q5U649 245 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 C16orf86Q6ZW13 317 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 BMP8AQ7Z5Y6 402 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 TMCO2Q7Z6W1 182 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-236ENST00000556220 ADHFE1Q8IWW8 467 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 LCORLQ8N3X6 602 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 PRRX2Q99811 253 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 MTUS1Q9ULD2 1270 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 FAM50BQ9Y247 325 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
ATXN3-236ENST00000556220 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
ATXN3-236ENST00000556220 CACNA1GO43497 2377 aa8.19□□□□□ -1.1
ATXN3-236ENST00000556220 TCRBV5S4A2TA0A5A2 114 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms