RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
ACTN1-216ENST00000556083 SLC10A4Q96EP9 437 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 LMCD1Q9NZU5 365 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PRKG1Q13976 671 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 TAF11Q15544 211 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 NXNQ6DKJ4 435 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 SARM1Q6SZW1 724 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 MICAL1Q8TDZ2 1067 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 NSUN6Q8TEA1 469 aaKnown RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 ATP6V0A4Q9HBG4 840 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 EHD2Q9NZN4 543 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 GGPS1O95749 300 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 MT-ND3P03897 115 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 CFAP61Q8NHU2 1237 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 SH3TC2Q8TF17 1288 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 STAMQ92783 540 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 MRRFQ96E11 262 aaKnown RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 KLC2Q9H0B6 622 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 STAP1Q9ULZ2 295 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 PACSIN2Q9UNF0 486 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 GOLGA8JA6NMD2 632 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 ZBTB5O15062 677 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 LMNAP02545 664 aaKnown RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 KRT1P04264 644 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 CYP2E1P05181 493 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 ZFXP17010 805 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 LAMB3Q13751 1172 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 MESDQ14696 234 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 TAF1BQ53T94 588 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-216ENST00000556083 KIFC3Q9BVG8 833 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
ACTN1-216ENST00000556083 STXBP3O00186 592 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 GFPT2O94808 682 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 PTPN12Q05209 780 aaKnown RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 EHHADHQ08426 723 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 NRBF2Q96F24 287 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 NDST4Q9H3R1 872 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 ASNSD1Q9NWL6 643 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 ZHX1Q9UKY1 873 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 USP17L2Q6R6M4 530 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 ELOA2Q8IYF1 753 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 BCAS4Q8TDM0 211 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 DDX50Q9BQ39 737 aaKnown RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 PPCSQ9HAB8 311 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 NDE1Q9NXR1 346 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 GCNT4Q9P109 453 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 TXNDC9O14530 226 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 KRT38O76015 456 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 CASP14P31944 242 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 CDK8P49336 464 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 MAPK6Q16659 721 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 RNF207Q6ZRF8 634 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 MIGA2Q7L4E1 593 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 VSTM4Q8IW00 320 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 ELMOD1Q8N336 334 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 DNAAF3Q8N9W5 541 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 BEST2Q8NFU1 509 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 ZBTB18Q99592 522 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 UPF3AQ9H1J1 476 aaKnown RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 RABEP2Q9H5N1 569 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 CEP72Q9P209 647 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 BAIAP2L1Q9UHR4 511 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 TMCC1O94876 653 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 RECQLP46063 649 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-216ENST00000556083 USP11P51784 963 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 GUCY2DQ02846 1103 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 LRRC31Q6UY01 552 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 RAPH1Q70E73 1250 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 TADA2BQ86TJ2 420 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 MTRQ99707 1265 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 TEX12Q9BXU0 123 aa11.54□□□□□ -0.56
ACTN1-216ENST00000556083 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 USP17L5A8MUK1 530 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ABL1P00519 1130 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 EFNA5P52803 228 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 SNRPFP62306 86 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 CLIC4Q9Y696 253 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 KIF1BO60333 1816 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ASB14A6NK59 587 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 KPNA7A9QM74 516 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 GOLGA8HP0CJ92 632 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 TSPY1Q01534 308 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ERICH1Q86X53 443 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 TTLL11Q8NHH1 800 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 PIGSQ96S52 555 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 TTC36A6NLP5 189 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 M0R2C6 588 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ZBED1O96006 694 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 PRELPP51888 382 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms