RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 AGAP11Q8TF27 550 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 MMTAG2Q9BU76 263 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 AP1M1Q9BXS5 423 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 PACSIN1Q9BY11 444 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 DDX47Q9H0S4 455 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 STMN4Q9H169 189 aaPredicted RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 A0A0A6YYK5 440 aaPredicted RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 KLHL33A6NCF5 533 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 MYMKA6NI61 221 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 USP17L12C9JPN9 530 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 USP17L21D6R901 530 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 STXBP3O00186 592 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 AGTP01019 485 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 MKRN4PQ13434 485 aaPredicted RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 GRM4Q14833 912 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 NONOQ15233 471 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHD8-209ENST00000555935 CHRNA2Q15822 529 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 ZCWPW2Q504Y3 356 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 SLFN11Q7Z7L1 901 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 KIRREL3Q8IZU9 778 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 NEK9Q8TD19 979 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 LARP4BQ92615 738 aaKnown RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 ABCF2Q9UG63 623 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 AMACRQ9UHK6 382 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 ERVV-1B6SEH8 477 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 SNAP23O00161 211 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 TTI1O43156 1089 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 NMT2O60551 498 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 CAND2O75155 1236 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 PDE6CP51160 858 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 CCNG1P51959 295 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 NPEPPSP55786 919 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 LMNB2Q03252 620 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 ADCY2Q08462 1091 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 AP1ARQ63HQ0 302 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 MIS18BP1Q6P0N0 1132 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 PEX26Q7Z412 305 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 NEK8Q86SG6 692 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 LRRC34Q8IZ02 419 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 MYOCDQ8IZQ8 938 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 TPCN2Q8NHX9 752 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 CDK5RAP3Q96JB5 506 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 IFT74Q96LB3 600 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 ZNF570Q96NI8 536 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 SELENOSQ9BQE4 189 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 PLCD4Q9BRC7 762 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 GANQ9H2C0 597 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 PABPC3Q9H361 631 aaKnown RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 BLOC1S4Q9NUP1 217 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 INTS9Q9NV88 658 aaKnown RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 SLC5A4Q9NY91 659 aa8.48□□□□□ -1.05
CHD8-209ENST00000555935 DIS3Q9Y2L1 958 aaKnown RBP8.48□□□□□ -1.05
CHD8-209ENST00000555935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHD8-209ENST00000555935 CASZ1Q86V15 1759 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ANKRD33BA6NCL7 494 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 TSPY2A6NKD2 308 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 CCNT1O60563 726 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 TECP42680 631 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 NCALDP61601 193 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 POU5F1Q01860 360 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 GRB10Q13322 594 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 BLMHQ13867 455 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 CLUL1Q15846 466 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 NBPF20Q3BBV1 942 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 SBK1Q52WX2 424 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 FAM47AQ5JRC9 791 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 C6orf118Q5T5N4 469 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 DENND2CQ68D51 928 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 BTNL9Q6UXG8 535 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 HEATR3Q7Z4Q2 680 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 TRIM59Q8IWR1 403 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 FAM133AQ8N9E0 248 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ELAC2Q9BQ52 826 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 LZTS2Q9BRK4 669 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 TMEM109Q9BVC6 243 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ZMYND12Q9H0C1 365 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ADAM7Q9H2U9 754 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 PANK4Q9NVE7 773 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 TMOD3Q9NYL9 352 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ARPP21Q9UBL0 812 aaPredicted RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 CNOT7Q9UIV1 285 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 INTUQ9ULD6 942 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 STXBP5LQ9Y2K9 1186 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ATP8A1Q9Y2Q0 1164 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 L3MBTL1Q9Y468 752 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 ANKRD36CQ5JPF3 1778 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 FAM187AA6NFU0 413 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 RGS16O15492 202 aaPredicted RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 SKAP2O75563 359 aaPredicted RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 FLOT1O75955 427 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 WFS1O76024 890 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 GBP1P32455 592 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 IGHMBP2P38935 993 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 PMS2P54278 862 aa8.47□□□□□ -1.05
CHD8-209ENST00000555935 DRG2P55039 364 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
CHD8-209ENST00000555935 MAP2K1Q02750 393 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms