RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ELNP15502 786 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 PLCG1P19174 1290 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 IL17AQ16552 155 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 DGKDQ16760 1214 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 CAVIN1Q6NZI2 390 aaKnown RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 OTUD6AQ7L8S5 288 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 CTU1Q7Z7A3 348 aaKnown RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 FMR1NBQ8N0W7 255 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 LARP4BQ92615 738 aaKnown RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 GLG1Q92896 1179 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 NACC1Q96RE7 527 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 ARHGEF35A5YM69 484 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
SHMT2-220ENST00000555634 DUSP11O75319 330 aaKnown RBP12.51□□□□□ -0.41
SHMT2-220ENST00000555634 NR1I2O75469 434 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 SMC2O95347 1197 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 ARIH2O95376 493 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 INHAP05111 366 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHMT2-220ENST00000555634 SLFN14P0C7P3 912 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-220ENST00000555634 HYIQ5T013 277 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 PDXDC2PQ6P474 469 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 SV2BQ7L1I2 683 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 EXOC8Q8IYI6 725 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 DYDC2Q96IM9 177 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 SMARCAD1Q9H4L7 1026 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-220ENST00000555634 PDGFCQ9NRA1 345 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 PTCH2Q9Y6C5 1203 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 IGSF9BQ9UPX0 1349 aa12.51□□□□□ -0.41
SHMT2-220ENST00000555634 KPNA6O60684 536 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 CCNE2O96020 404 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
SHMT2-220ENST00000555634 SMPD1P17405 629 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 LIG1P18858 919 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 CDC25AP30304 524 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 SP2Q02086 613 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 PRKCEQ02156 737 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-220ENST00000555634 CTTNQ14247 550 aaKnown RBP12.5□□□□□ -0.41
SHMT2-220ENST00000555634 TMEM119Q4V9L6 283 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 KRBA2Q6ZNG9 492 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 CATSPER3Q86XQ3 398 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 GPR20Q99678 358 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 CLSTN2Q9H4D0 955 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 XPNPEP3Q9NQH7 507 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 RMND1Q9NWS8 449 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 ERAP1Q9NZ08 941 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-220ENST00000555634 PTPN22Q9Y2R2 807 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
SHMT2-220ENST00000555634 EML1O00423 815 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 FOXN1O15353 648 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 MED24O75448 989 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 OATP04181 439 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 MMP3P08254 477 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 C6orf222P0C671 652 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 YWHABP31946 246 aaKnown RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 STAT5BP51692 787 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 FSCN1Q16658 493 aaKnown RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 B3GNT9Q6UX72 402 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 RNF180Q86T96 592 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 C4orf19Q8IY42 314 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 PCSK9Q8NBP7 692 aaKnown RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 AFAP1L1Q8TED9 768 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 RAD54LQ92698 747 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 PLIN2Q99541 437 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 PANK2Q9BZ23 570 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
SHMT2-220ENST00000555634 NRBP2Q9NSY0 501 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 TRPC6Q9Y210 931 aa12.49□□□□□ -0.41
SHMT2-220ENST00000555634 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
SHMT2-220ENST00000555634 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-220ENST00000555634 DYNC1LI2O43237 492 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-220ENST00000555634 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
SHMT2-220ENST00000555634 LYPLA2O95372 231 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms