RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
GABRB3-209ENST00000555632 WDR90Q96KV7 1748 aa20.4■□□□□ 0.86
GABRB3-209ENST00000555632 AGPAT5Q9NUQ2 364 aa20.4■□□□□ 0.86
GABRB3-209ENST00000555632 FANCGO15287 622 aa20.39■□□□□ 0.86
GABRB3-209ENST00000555632 KCNA1Q09470 495 aa20.39■□□□□ 0.86
GABRB3-209ENST00000555632 PLS1Q14651 629 aa20.39■□□□□ 0.86
GABRB3-209ENST00000555632 SYT10Q6XYQ8 523 aa20.39■□□□□ 0.86
GABRB3-209ENST00000555632 TSG101Q99816 390 aa20.39■□□□□ 0.86
GABRB3-209ENST00000555632 TTYH3Q9C0H2 523 aa20.39■□□□□ 0.86
GABRB3-209ENST00000555632 OTOFQ9HC10 1997 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 TESPA1A2RU30 521 aaPredicted RBP20.39■□□□□ 0.85
GABRB3-209ENST00000555632 PRPF6O94906 941 aaKnown RBP20.39■□□□□ 0.85
GABRB3-209ENST00000555632 FECHP22830 423 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 FKBP3Q00688 224 aaKnown RBP20.39■□□□□ 0.85
GABRB3-209ENST00000555632 VWA3BQ502W6 1294 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 EPM2AIP1Q7L775 607 aaPredicted RBP20.39■□□□□ 0.85
GABRB3-209ENST00000555632 NIPA1Q7RTP0 329 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 MIER3Q7Z3K6 550 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 CCDC155Q8N6L0 562 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 IKZF4Q9H2S9 585 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 NDST4Q9H3R1 872 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 PCNTO95613 3336 aa20.39■□□□□ 0.85
GABRB3-209ENST00000555632 PTPRFP10586 1907 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 TPM2P07951 284 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 TPM1P09493 284 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 TRIM14Q14142 442 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 SH3D19Q5HYK7 790 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 TRIM65Q6PJ69 517 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 CLMNQ96JQ2 1002 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 CHP1Q99653 195 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 MRPL44Q9H9J2 332 aaKnown RBP20.38■□□□□ 0.85
GABRB3-209ENST00000555632 NACC1Q96RE7 527 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 SH2D3AQ9BRG2 576 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 TEX13BQ9BXU2 312 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 SAMM50Q9Y512 469 aa20.38■□□□□ 0.85
GABRB3-209ENST00000555632 EPHB6O15197 1021 aa20.37■□□□□ 0.85
GABRB3-209ENST00000555632 TBCAO75347 108 aaKnown RBP20.37■□□□□ 0.85
GABRB3-209ENST00000555632 OAZ1P54368 228 aa20.37■□□□□ 0.85
GABRB3-209ENST00000555632 FOXR2Q6PJQ5 311 aa20.37■□□□□ 0.85
GABRB3-209ENST00000555632 TRMT1LQ7Z2T5 733 aaKnown RBP20.37■□□□□ 0.85
GABRB3-209ENST00000555632 CCDC51Q96ER9 411 aa20.37■□□□□ 0.85
GABRB3-209ENST00000555632 NAA15Q9BXJ9 866 aaKnown RBP20.37■□□□□ 0.85
GABRB3-209ENST00000555632 A1CFQ9NQ94 594 aaKnown RBP20.37■□□□□ 0.85
GABRB3-209ENST00000555632 CAPN11Q9UMQ6 739 aa20.37■□□□□ 0.85
GABRB3-209ENST00000555632 PAPPA2Q9BXP8 1791 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 TMEM150BA6NC51 233 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 IRF6O14896 467 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 NR3C2P08235 984 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 TRIM21P19474 475 aaKnown RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 HOXA7P31268 230 aaPredicted RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 MAN2A1Q16706 1144 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 KCTD17Q8N5Z5 321 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 SAMD3Q8N6K7 520 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 ERGIC2Q96RQ1 377 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 ELP3Q9H9T3 547 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 HOXC10Q9NYD6 342 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 CYP39A1Q9NYL5 469 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 LUC7L2Q9Y383 392 aaKnown RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 PAXBP1Q9Y5B6 917 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 COL4A3BPQ9Y5P4 624 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 ADGRG1Q9Y653 693 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 ATP2A1O14983 1001 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 ZSCAN12O43309 604 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 RGS20O76081 388 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 GCNT3O95395 438 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 NMT1P30419 496 aaKnown RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 UGCGQ16739 394 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 WDR59Q6PJI9 974 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 VSIG10LQ86VR7 867 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 PCMTD1Q96MG8 357 aaPredicted RBP20.36■□□□□ 0.85
GABRB3-209ENST00000555632 PNMA2Q9UL42 364 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 TELO2Q9Y4R8 837 aa20.36■□□□□ 0.85
GABRB3-209ENST00000555632 CCNE2O96020 404 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 ADAM9Q13443 819 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 KNOP1Q1ED39 458 aaKnown RBP20.35■□□□□ 0.85
GABRB3-209ENST00000555632 ZC2HC1CQ53FD0 456 aaPredicted RBP20.35■□□□□ 0.85
GABRB3-209ENST00000555632 KSR1Q8IVT5 923 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 MYCT1Q8N699 235 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 OTUD5Q96G74 571 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 FIZ1Q96SL8 496 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 DNAJC7Q99615 494 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 SIK3Q9Y2K2 1263 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 CSADQ9Y600 493 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 MUTP22033 750 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 GTF2F1P35269 517 aaKnown RBP eCLIP20.35■□□□□ 0.85
GABRB3-209ENST00000555632 FKBP15Q5T1M5 1219 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 MAEAQ7L5Y9 396 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 ACRBPQ8NEB7 543 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 OR8K1Q8NGG5 319 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 KIF18AQ8NI77 898 aa20.35■□□□□ 0.85
GABRB3-209ENST00000555632 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
GABRB3-209ENST00000555632 IRX2Q9BZI1 471 aaPredicted RBP20.35■□□□□ 0.85
GABRB3-209ENST00000555632 CCP110O43303 1012 aa20.34■□□□□ 0.85
GABRB3-209ENST00000555632 FAM13AO94988 1023 aa20.34■□□□□ 0.85
GABRB3-209ENST00000555632 P4HBP07237 508 aaKnown RBP20.34■□□□□ 0.85
GABRB3-209ENST00000555632 NR2F2P24468 414 aa20.34■□□□□ 0.85
GABRB3-209ENST00000555632 ETF1P62495 437 aaKnown RBP20.34■□□□□ 0.85
GABRB3-209ENST00000555632 CCDC40Q4G0X9 1142 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms