RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 EPM2AIP1Q7L775 607 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 CRYGNQ8WXF5 182 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 INPP4AQ96PE3 977 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 ARMCX3Q9UH62 379 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 TMEM59LQ9UK28 342 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 HDAC9Q9UKV0 1011 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 GTPBP10A4D1E9 387 aaKnown RBP17.74■□□□□ 0.43
TUBB3-209ENST00000555609 POTECB2RU33 542 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.43
TUBB3-209ENST00000555609 QRICH1Q2TAL8 776 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 ARSHQ5FYA8 562 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 NELFCDQ8IXH7 590 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 EFCAB13Q8IY85 973 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 C10orf67Q8IYJ2 551 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 IQCKQ8N0W5 287 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 CALR3Q96L12 384 aaKnown RBP17.74■□□□□ 0.43
TUBB3-209ENST00000555609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.74■□□□□ 0.43
TUBB3-209ENST00000555609 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 DAAM1Q9Y4D1 1078 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 PCDHA1Q9Y5I3 950 aa17.74■□□□□ 0.43
TUBB3-209ENST00000555609 A0A087X0T9 212 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 A0A0A6YYK5 440 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 PPEF1O14829 653 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 FAM228BP0C875 321 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 MYBP10242 640 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 NR2F2P24468 414 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 MMP14P50281 582 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 GIT2Q14161 759 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 RPS6KA1Q15418 735 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 CFAP58Q5T655 872 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 IRF2BP2Q7Z5L9 587 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 VPS36Q86VN1 386 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 FMNL3Q8IVF7 1028 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 USP38Q8NB14 1042 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 ETNPPLQ8TBG4 499 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 ACTRT1Q8TDG2 376 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 MYH7BA7E2Y1 1941 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 SHTN1A0MZ66 631 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 SRRM3A6NNA2 597 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 MED24O75448 989 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 FLOT1O75955 427 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 CIITAP33076 1130 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 SLC16A2P36021 539 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 NPEPPSP55786 919 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 NFIL3Q16649 462 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 DPY19L2P1Q6NXN4 242 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 FOXR1Q6PIV2 292 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 SPATS2Q86XZ4 545 aaKnown RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 FAM133AQ8N9E0 248 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 TSEN2Q8NCE0 465 aaKnown RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 TEKT1Q969V4 418 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 ZC3H12CQ9C0D7 883 aaKnown RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 TYW1Q9NV66 732 aaKnown RBP17.73■□□□□ 0.43
TUBB3-209ENST00000555609 TBC1D7Q9P0N9 293 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 ADAMTS1Q9UHI8 967 aa17.73■□□□□ 0.43
TUBB3-209ENST00000555609 MYH10P35580 1976 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 MPHOSPH10O00566 681 aaKnown RBP17.72■□□□□ 0.43
TUBB3-209ENST00000555609 GAP43P17677 238 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 BAG6P46379 1132 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 ARHGAP4P98171 946 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 CUL1Q13616 776 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 EXOC3L4Q17RC7 722 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 CDC42EP5Q6NZY7 148 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 MS4A14Q96JA4 679 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 SPAG5Q96R06 1193 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 PSMB7Q99436 277 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 POLR3CQ9BUI4 534 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-209ENST00000555609 FGFBP2Q9BYJ0 223 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
TUBB3-209ENST00000555609 EBAG9O00559 213 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 ZEB2O60315 1214 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 GLI1P08151 1106 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 XRCC5P13010 732 aaKnown RBP17.71■□□□□ 0.43
TUBB3-209ENST00000555609 UCHL3P15374 230 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 TRAF1Q13077 416 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 SLFN13Q68D06 897 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 LRIG3Q6UXM1 1119 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 CATSPER3Q86XQ3 398 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 ZIM3Q96PE6 472 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 A0A087WUV0 522 aaPredicted RBP17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L15C9J2P7 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L13C9JLJ4 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L11C9JVI0 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L18D6R9N7 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L22D6RA61 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L17D6RBQ6 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L19D6RCP7 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L20D6RJB6 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 CCDC188H7C350 402 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 MEIS2O14770 477 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms