RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 FAM117BQ6P1L5 589 aa27.82■■■□□ 2.04
PRKCH-216ENST00000555542 FAM86B1E9PN63 330 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 RBAK-RBAKDNI3L0D1 243 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 FAM86B2P0C5J1 330 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 STAT5BP51692 787 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 NLRP5P59047 1200 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 CCDC85BQ15834 202 aaPredicted RBP27.81■■■□□ 2.04
PRKCH-216ENST00000555542 PLEKHG4Q58EX7 1191 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 CPLX2Q6PUV4 134 aaKnown RBP27.81■■■□□ 2.04
PRKCH-216ENST00000555542 RUFY4Q6ZNE9 571 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 MICALL1Q8N3F8 863 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 USP38Q8NB14 1042 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 RASGRP4Q8TDF6 673 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 ARNTL2Q8WYA1 636 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 UIMC1Q96RL1 719 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 PCYT2Q99447 389 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 TCEAL9Q9UHQ7 104 aa27.81■■■□□ 2.04
PRKCH-216ENST00000555542 EYSQ5T1H1 3165 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 BACH1O14867 736 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 GJB5O95377 273 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 CYP3A4P08684 503 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 SETQ01105 290 aaPredicted RBP27.8■■■□□ 2.04
PRKCH-216ENST00000555542 TAP1Q03518 808 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 MYOCDQ8IZQ8 938 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 ZNF274Q96GC6 653 aaPredicted RBP27.8■■■□□ 2.04
PRKCH-216ENST00000555542 MICAL3Q7RTP6 2002 aa27.8■■■□□ 2.04
PRKCH-216ENST00000555542 RRN3P2A6NIE6 340 aa27.79■■■□□ 2.04
PRKCH-216ENST00000555542 ADAMTS3O15072 1205 aa27.79■■■□□ 2.04
PRKCH-216ENST00000555542 INSRRP14616 1297 aa27.79■■■□□ 2.04
PRKCH-216ENST00000555542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.79■■■□□ 2.04
PRKCH-216ENST00000555542 PLPPR4Q7Z2D5 763 aa27.79■■■□□ 2.04
PRKCH-216ENST00000555542 RAD9AQ99638 391 aa27.79■■■□□ 2.04
PRKCH-216ENST00000555542 ZNF577Q9BSK1 485 aa27.79■■■□□ 2.04
PRKCH-216ENST00000555542 LCHNA4D1U4 455 aa27.78■■■□□ 2.04
PRKCH-216ENST00000555542 IPO5O00410 1097 aaKnown RBP27.78■■■□□ 2.04
PRKCH-216ENST00000555542 GTPBP6O43824 516 aaPredicted RBP27.78■■■□□ 2.04
PRKCH-216ENST00000555542 FAM26DQ5JW98 314 aa27.78■■■□□ 2.04
PRKCH-216ENST00000555542 FAM160B1Q5W0V3 765 aa27.78■■■□□ 2.04
PRKCH-216ENST00000555542 DNAJB3Q8WWF6 145 aa27.78■■■□□ 2.04
PRKCH-216ENST00000555542 APBB2Q92870 758 aa27.78■■■□□ 2.04
PRKCH-216ENST00000555542 IFIH1Q9BYX4 1025 aaKnown RBP27.78■■■□□ 2.04
PRKCH-216ENST00000555542 SH3GLB2Q9NR46 395 aa27.78■■■□□ 2.04
PRKCH-216ENST00000555542 IGLV3-22A0A075B6J6 115 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 RFXAPO00287 272 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 ARHGEF15O94989 841 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 PLCB4Q15147 1175 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 PRR16Q569H4 304 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 MIS18BP1Q6P0N0 1132 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 CRYGNQ8WXF5 182 aa27.77■■■□□ 2.04
PRKCH-216ENST00000555542 FAM49AQ9H0Q0 323 aaPredicted RBP27.77■■■□□ 2.04
PRKCH-216ENST00000555542 POTEB3A0JP26 581 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 MBLAC1A4D2B0 266 aaPredicted RBP27.76■■■□□ 2.03
PRKCH-216ENST00000555542 DEXIO95424 95 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 CCNE2O96020 404 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 SLC26A2P50443 739 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 MARCH8Q5T0T0 291 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 POTEBQ6S5H4 581 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 RPAINQ86UA6 219 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 OSBPL7Q9BZF2 842 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 TBC1D22BQ9NU19 505 aa27.76■■■□□ 2.03
PRKCH-216ENST00000555542 M0QZ92 97 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 ATG7O95352 703 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 CHRNA1P02708 482 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 RPLP2P05387 115 aaKnown RBP27.75■■■□□ 2.03
PRKCH-216ENST00000555542 GHRP10912 638 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 TRAPPC12Q8WVT3 735 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 ZBTB10Q96DT7 871 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 ZNF302Q9NR11 478 aa27.75■■■□□ 2.03
PRKCH-216ENST00000555542 PDXDC2PQ6P474 469 aa27.74■■■□□ 2.03
PRKCH-216ENST00000555542 CKAP2LQ8IYA6 745 aa27.74■■■□□ 2.03
PRKCH-216ENST00000555542 MTUS1Q9ULD2 1270 aa27.74■■■□□ 2.03
PRKCH-216ENST00000555542 INSL6Q9Y581 213 aa27.74■■■□□ 2.03
PRKCH-216ENST00000555542 CDY2AQ9Y6F7 541 aa27.74■■■□□ 2.03
PRKCH-216ENST00000555542 UNC80Q8N2C7 3258 aa27.74■■■□□ 2.03
PRKCH-216ENST00000555542 EPOPA6NHQ4 379 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 CDKL5O76039 1030 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 UPP2O95045 317 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 MRPS6P82932 125 aaKnown RBP27.73■■■□□ 2.03
PRKCH-216ENST00000555542 ABHD15Q6UXT9 468 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 COL25A1Q9BXS0 654 aaPredicted RBP27.73■■■□□ 2.03
PRKCH-216ENST00000555542 SLKQ9H2G2 1235 aaPredicted RBP27.73■■■□□ 2.03
PRKCH-216ENST00000555542 TSPYL2Q9H2G4 693 aaPredicted RBP27.73■■■□□ 2.03
PRKCH-216ENST00000555542 PRDM6Q9NQX0 595 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 PCDHA4Q9UN74 947 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 SAMM50Q9Y512 469 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 SIP14410 1827 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 CHD9Q3L8U1 2897 aa27.73■■■□□ 2.03
PRKCH-216ENST00000555542 DHX15O43143 795 aaKnown RBP27.72■■■□□ 2.03
PRKCH-216ENST00000555542 MGAT3Q09327 533 aa27.72■■■□□ 2.03
PRKCH-216ENST00000555542 SKIV2LQ15477 1246 aaKnown RBP27.72■■■□□ 2.03
PRKCH-216ENST00000555542 IER5Q5VY09 327 aa27.72■■■□□ 2.03
PRKCH-216ENST00000555542 SWSAP1Q6NVH7 229 aa27.72■■■□□ 2.03
PRKCH-216ENST00000555542 SPRED2Q7Z698 418 aa27.72■■■□□ 2.03
PRKCH-216ENST00000555542 CCDC60Q8IWA6 550 aaPredicted RBP27.72■■■□□ 2.03
PRKCH-216ENST00000555542 YME1L1Q96TA2 773 aa27.72■■■□□ 2.03
PRKCH-216ENST00000555542 C22orf23Q9BZE7 217 aa27.72■■■□□ 2.03
PRKCH-216ENST00000555542 IGKV6D-21A0A0A0MT36 114 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 HBP1O60381 514 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 CIITAP33076 1130 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 ANAPC15P60006 121 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms