RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TRAPPC12Q8WVT3 735 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 TNFRSF25Q93038 417 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 SMARCAD1Q9H4L7 1026 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 ERAP1Q9NZ08 941 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 CYP3A7-CYP3A51PA0A087WV96 503 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 SLC37A4O43826 429 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 INSRRP14616 1297 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 ATP4AP20648 1035 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 CYP3A7P24462 503 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 PBX2P40425 430 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 SMAD3P84022 425 aaKnown RBP15.51■□□□□ 0.07
SNX6-203ENST00000555416 PPFIA1Q13136 1202 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 NONOQ15233 471 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNX6-203ENST00000555416 GRIK4Q16099 956 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 KRT25Q7Z3Z0 450 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 RPUSD2Q8IZ73 545 aaKnown RBP15.51■□□□□ 0.07
SNX6-203ENST00000555416 DEFB123Q8N688 67 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 SLC5A5Q92911 643 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 MBOAT7Q96N66 472 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 GTF3C3Q9Y5Q9 886 aa15.51■□□□□ 0.07
SNX6-203ENST00000555416 NRCAMQ92823 1304 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 THPOP40225 353 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 STAT5BP51692 787 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 IGBP1P78318 339 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 Q4G0T1 1027 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 PIK3AP1Q6ZUJ8 805 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 CCDC155Q8N6L0 562 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 WASF1Q92558 559 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 FAM161BQ96MY7 647 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 TBC1D32Q96NH3 1257 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 FTOQ9C0B1 505 aaKnown RBP eCLIP15.5■□□□□ 0.07
SNX6-203ENST00000555416 TTYH1Q9H313 450 aaPredicted RBP15.5■□□□□ 0.07
SNX6-203ENST00000555416 TBC1D22BQ9NU19 505 aa15.5■□□□□ 0.07
SNX6-203ENST00000555416 CHD9Q3L8U1 2897 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.49■□□□□ 0.07
SNX6-203ENST00000555416 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.49■□□□□ 0.07
SNX6-203ENST00000555416 MBLAC1A4D2B0 266 aaPredicted RBP15.49■□□□□ 0.07
SNX6-203ENST00000555416 BTBD18B2RXH4 712 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 WNT7AO00755 349 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 CXCL10P02778 98 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 CTSHP09668 335 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 RFC2P35250 354 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 GUCY1B3Q02153 619 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 RABEP1Q15276 862 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 LETM2Q2VYF4 491 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 KRT40Q6A162 431 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 GPR153Q6NV75 609 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 SWSAP1Q6NVH7 229 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 PLPPR4Q7Z2D5 763 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 ETNPPLQ8TBG4 499 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 UNC45AQ9H3U1 944 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 AZI2Q9H6S1 392 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 MTMR10Q9NXD2 777 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
SNX6-203ENST00000555416 CCDC194A0A1B0GVG4 234 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 ZBBXA8MT70 800 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 RSPH10B2B2RC85 870 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 ZBTB42B2RXF5 422 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 BACH1O14867 736 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 PSMD10O75832 226 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 MMP1P03956 469 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 PFKMP08237 780 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 RSPH10BP0C881 870 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 GNAT1P11488 350 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 XBP1P17861 261 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 DNAJB2P25686 324 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 KRT2P35908 639 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 RABGGTBP53611 331 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 UGCGQ16739 394 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 ZNF746Q6NUN9 644 aaPredicted RBP15.48■□□□□ 0.07
SNX6-203ENST00000555416 MIS18BP1Q6P0N0 1132 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 ZSCAN31Q96LW9 406 aaPredicted RBP15.48■□□□□ 0.07
SNX6-203ENST00000555416 RIT2Q99578 217 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 PBX4Q9BYU1 374 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 ZNF302Q9NR11 478 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 DDX25Q9UHL0 483 aaKnown RBP15.48■□□□□ 0.07
SNX6-203ENST00000555416 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 KAT6AQ92794 2004 aa15.48■□□□□ 0.07
SNX6-203ENST00000555416 POTEB3A0JP26 581 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 CHMP2AO43633 222 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 ZNF862O60290 1169 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 GAS7O60861 476 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 CHRNA1P02708 482 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 MYOGP15173 224 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 KRT76Q01546 638 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 LRCH2Q5VUJ6 765 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 PDXDC2PQ6P474 469 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 POTEBQ6S5H4 581 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 MOXD1Q6UVY6 613 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 B3GNT9Q6UX72 402 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 TRMT1LQ7Z2T5 733 aaKnown RBP15.47■□□□□ 0.07
SNX6-203ENST00000555416 TMCO2Q7Z6W1 182 aaPredicted RBP15.47■□□□□ 0.07
SNX6-203ENST00000555416 NEK8Q86SG6 692 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 DIS3L2Q8IYB7 885 aaKnown RBP15.47■□□□□ 0.07
SNX6-203ENST00000555416 DNAJB3Q8WWF6 145 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 GABBR1Q9UBS5 961 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 YBX2Q9Y2T7 364 aaKnown RBP15.47■□□□□ 0.07
SNX6-203ENST00000555416 MAFBQ9Y5Q3 323 aaPredicted RBP15.47■□□□□ 0.07
SNX6-203ENST00000555416 PTPRSQ13332 1948 aa15.47■□□□□ 0.07
SNX6-203ENST00000555416 GBF1Q92538 1859 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms