RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 TMEM192Q8IY95 271 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 DNAJB8Q8NHS0 232 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 RIN3Q8TB24 985 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 PPP1R13LQ8WUF5 828 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 RNF141Q8WVD5 230 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 HHIPL1Q96JK4 782 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 KREMEN1Q96MU8 473 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 SRPK1Q96SB4 655 aaKnown RBP5.18□□□□□ -1.58
CPSF2-204ENST00000555244 ASPNQ9BXN1 380 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 COA1Q9GZY4 146 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 MKRN2Q9H000 416 aaKnown RBP5.18□□□□□ -1.58
CPSF2-204ENST00000555244 USP44Q9H0E7 712 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 CCDC113Q9H0I3 377 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 ST7Q9NRC1 585 aa5.18□□□□□ -1.58
CPSF2-204ENST00000555244 CNOT7Q9UIV1 285 aaKnown RBP5.18□□□□□ -1.58
CPSF2-204ENST00000555244 SCN9AQ15858 1988 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 ANKRD18BA2A2Z9 1011 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 PRR19A6NJB7 356 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 H7C1D1 291 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 RAD17O75943 681 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 GJB6O95452 261 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 EOMESO95936 686 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 NBPF7P0C2Y1 421 aaPredicted RBP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 IL1R1P14778 569 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 KIR3DL1P43629 444 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 RARSP54136 660 aaKnown RBP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 FKBP1AP62942 108 aaKnown RBP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 IFRD2Q12894 506 aaPredicted RBP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 IFIT5Q13325 482 aaKnown RBP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 UBE4AQ14139 1066 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 BMS1Q14692 1282 aaKnown RBP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 CPSF6Q16630 551 aaKnown RBP eCLIP5.17□□□□□ -1.58
CPSF2-204ENST00000555244 DACT2Q5SW24 774 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 STRIP1Q5VSL9 837 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 KIAA1211LQ6NV74 962 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 LMBR1LQ6UX01 489 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 EEPD1Q7L9B9 569 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 CCDC144CPQ8IYA2 1237 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 CELF2-AS1Q8N7Q2 184 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 ANKRD44Q8N8A2 993 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 SUCLG2Q96I99 432 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 FBXL18Q96ME1 805 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 MPHOSPH8Q99549 860 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 OSBPL1AQ9BXW6 950 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 DBNDD1Q9H9R9 158 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 KCNH3Q9ULD8 1083 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 RIPOR2Q9Y4F9 1068 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 PSME4Q14997 1843 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 ZNF804BA4D1E1 1349 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 KIF16BQ96L93 1317 aa5.17□□□□□ -1.58
CPSF2-204ENST00000555244 CNTNAP1P78357 1384 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 WTIPA6NIX2 430 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 CCDC85CA6NKD9 419 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 IGF2BP3O00425 579 aaKnown RBP eCLIP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 PDPK1O15530 556 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 LEFTY1O75610 366 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 TP53P04637 393 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 ADMP35318 185 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 ZNF143P52747 638 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 HTRA3P83110 453 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 CHRNDQ07001 517 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 TCEAL1Q15170 157 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 CCDC57Q2TAC2 916 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 NBPF12Q5TAG4 269 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 CST9Q5W186 159 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 ZNF765Q7L2R6 523 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 SHISA5Q8N114 240 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 VGLL2Q8N8G2 317 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 GATA6Q92908 595 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 ZBED3Q96IU2 234 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 DEPDC7Q96QD5 511 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 API5Q9BZZ5 524 aaKnown RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 C9orf78Q9NZ63 289 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 PCDHB10Q9UN67 800 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 MSRB2Q9Y3D2 182 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 FAM205AQ6ZU69 1335 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 MYO3BQ8WXR4 1341 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 PITPNM2Q9BZ72 1349 aa5.16□□□□□ -1.58
CPSF2-204ENST00000555244 ZNF646O15015 1829 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-204ENST00000555244 KIAA1324LA8MWY0 1029 aaPredicted RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 ADAMTS4O75173 837 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 SASH1O94885 1247 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 F13BP05160 661 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 RFX5P48382 616 aaPredicted RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 GP2P55259 537 aaKnown RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 MTX1Q13505 466 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 RASGRF1Q13972 1273 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 ANKRD39Q53RE8 183 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 TDRD10Q5VZ19 366 aaKnown RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 HEATR6Q6AI08 1181 aaKnown RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 SLC4A10Q6U841 1118 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 LDHAL6AQ6ZMR3 332 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 C22orf34Q6ZV56 151 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 ST13P5Q8NFI4 369 aaPredicted RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 TDRD7Q8NHU6 1098 aaKnown RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 MICAL1Q8TDZ2 1067 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 VWCEQ96DN2 955 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 GPR101Q96P66 508 aaPredicted RBP5.15□□□□□ -1.59
CPSF2-204ENST00000555244 MRIQ9BWK5 157 aa5.15□□□□□ -1.59
CPSF2-204ENST00000555244 GBP3Q9H0R5 595 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms