RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 YBX1P67809 324 aaKnown RBP7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 SEC23AQ15436 765 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 PAN2Q504Q3 1202 aaKnown RBP7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 RASSF3Q86WH2 238 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 AHCYL2Q96HN2 611 aaKnown RBP7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 TRIM8Q9BZR9 551 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 TRHDEQ9UKU6 1024 aa7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
CKS1BP1-201ENST00000555221 MARCH6O60337 910 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 FAHP16930 419 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 GRIN1Q05586 938 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 EPHA7Q15375 998 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 CCDC8Q9H0W5 538 aaPredicted RBP7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 NGRNQ9NPE2 291 aaKnown RBP7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 DTLQ9NZJ0 730 aa7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 G3BP2Q9UN86 482 aaKnown RBP7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 NOC2LQ9Y3T9 749 aaKnown RBP7.31□□□□□ -1.24
CKS1BP1-201ENST00000555221 WASHC2AQ641Q2 1341 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 FBXO21O94952 628 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 PTX3P26022 381 aaPredicted RBP7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 ADCY1Q08828 1119 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 TTF1Q15361 905 aaPredicted RBP7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 CATSPEREQ5SY80 951 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 ETV3LQ6ZN32 361 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 FRMD7Q6ZUT3 714 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 AMIGO3Q86WK7 504 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 ALG3Q92685 438 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 E2F7Q96AV8 911 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 TOE1Q96GM8 510 aaKnown RBP7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 SMAD5Q99717 465 aaKnown RBP7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 HSPBP1Q9NZL4 362 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 USP36Q9P275 1121 aaKnown RBP7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 TCEAL9Q9UHQ7 104 aa7.3□□□□□ -1.24
CKS1BP1-201ENST00000555221 ACOT7O00154 380 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 NEK2P51955 445 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 ERVK-21P61565 698 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 KLF1Q13351 362 aaPredicted RBP7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 ESRP1Q6NXG1 681 aaKnown RBP7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 ZC3H18Q86VM9 953 aaKnown RBP7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 DDX11Q96FC9 970 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 C16orf92Q96LL3 132 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 ZDHHC5Q9C0B5 715 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 ASB1Q9Y576 335 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 HCFC2Q9Y5Z7 792 aa7.29□□□□□ -1.24
CKS1BP1-201ENST00000555221 GABRDO14764 452 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 TMC6Q7Z403 805 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 ASB15Q8WXK1 588 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 CHMP4CQ96CF2 233 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 GBP4Q96PP9 640 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 ZNF552Q9H707 407 aaPredicted RBP7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 C14orf119Q9NWQ9 140 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 KCNG1Q9UIX4 513 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 THRAP3Q9Y2W1 955 aaKnown RBP7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 EID1Q9Y6B2 187 aa7.28□□□□□ -1.24
CKS1BP1-201ENST00000555221 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 KDM1AO60341 852 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 PARNO95453 639 aaKnown RBP7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 MMEP08473 750 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 JUNBP17275 347 aaPredicted RBP7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 NKX3-2P78367 333 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 DBPQ10586 325 aaPredicted RBP7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 MPZL3Q6UWV2 235 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 NBPF11Q86T75 865 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 ZBTB46Q86UZ6 589 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 HIPK4Q8NE63 616 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 CPA5Q8WXQ8 436 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 TOPORSQ9NS56 1045 aaPredicted RBP7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 ARHGAP28Q9P2N2 729 aa7.27□□□□□ -1.25
CKS1BP1-201ENST00000555221 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 E2F8A0AVK6 867 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 SHTN1A0MZ66 631 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 PAPLNO95428 1278 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 CFBP00751 764 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 LRG1P02750 347 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 ITGB5P18084 799 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 AOAHP28039 575 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 VIPR1P32241 457 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 ZNF200P98182 395 aaPredicted RBP7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 MCL1Q07820 350 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 TARBP2Q15633 366 aaKnown RBP7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 ABCB5Q2M3G0 1257 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 TEPPQ6URK8 271 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 PHYKPLQ8IUZ5 450 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 CBARPQ8N350 705 aaPredicted RBP7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 C7orf31Q8N865 590 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 RTF1Q92541 710 aaKnown RBP7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 FAM168AQ92567 244 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 RNF38Q9H0F5 515 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 BCAS3Q9H6U6 928 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 CHPF2Q9P2E5 772 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 MSRAQ9UJ68 235 aa7.26□□□□□ -1.25
CKS1BP1-201ENST00000555221 UBA6A0AVT1 1052 aaPredicted RBP7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 GOLGA8AA7E2F4 631 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 GOLGA8BA8MQT2 603 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 ASGR2P07307 311 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 ENO2P09104 434 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms