RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MTFR1Q15390 333 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 DUSP28Q4G0W2 176 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 MAP3K21Q5TCX8 1036 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 DHX37Q8IY37 1157 aaKnown RBP12.07□□□□□ -0.48
TDP1-211ENST00000555178 SYAP1Q96A49 352 aaPredicted RBP12.07□□□□□ -0.48
TDP1-211ENST00000555178 GPR20Q99678 358 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 SDF4Q9BRK5 362 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 E9PMD0 336 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 GRK4P32298 578 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 CCT6AP40227 531 aaKnown RBP12.07□□□□□ -0.48
TDP1-211ENST00000555178 STAT6P42226 847 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 RRAGBQ5VZM2 374 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 MFSD14CQ5VZR4 134 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 IQSEC1Q6DN90 963 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 SWSAP1Q6NVH7 229 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 MPHOSPH6Q99547 160 aaKnown RBP12.07□□□□□ -0.48
TDP1-211ENST00000555178 MLXIPQ9HAP2 919 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 STBD1O95210 358 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 ATG7O95352 703 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 PGK1P00558 417 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 HMGCRP04035 888 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 DHX8Q14562 1220 aaKnown RBP12.06□□□□□ -0.48
TDP1-211ENST00000555178 METTL7BQ6UX53 244 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 TPH2Q8IWU9 490 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 PAGE5Q96GU1 130 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 CDHR1Q96JP9 859 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 KIAA1024Q9UPX6 916 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 GNRH1P01148 92 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 SLFN14P0C7P3 912 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 TCF7P36402 384 aaPredicted RBP12.06□□□□□ -0.48
TDP1-211ENST00000555178 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
TDP1-211ENST00000555178 EPHA7Q15375 998 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 TMEM119Q4V9L6 283 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
TDP1-211ENST00000555178 ZNF746Q6NUN9 644 aaPredicted RBP12.06□□□□□ -0.48
TDP1-211ENST00000555178 RBM43Q6ZSC3 357 aaKnown RBP12.06□□□□□ -0.48
TDP1-211ENST00000555178 GAS2L3Q86XJ1 694 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 IQUBQ8NA54 791 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 ZBTB10Q96DT7 871 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 TIGD1Q96MW7 591 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 BLZF1Q9H2G9 400 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 MYH11P35749 1972 aa12.06□□□□□ -0.48
TDP1-211ENST00000555178 BIN1O00499 593 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 GH1P01241 217 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 SUPT20HL2P0C7V6 817 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 KRT76Q01546 638 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 NEDD9Q14511 834 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 MCM6Q14566 821 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 ISM2Q6H9L7 571 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 TLK2Q86UE8 772 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 CALML4Q96GE6 196 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 LXNQ9BS40 222 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 CCDC39Q9UFE4 941 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 KIAA0100Q14667 2235 aaKnown RBP12.05□□□□□ -0.48
TDP1-211ENST00000555178 IGKV6D-21A0A0A0MT36 114 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 MARK3P27448 753 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 RPA1P27694 616 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 CTCFP49711 727 aaPredicted RBP12.05□□□□□ -0.48
TDP1-211ENST00000555178 POSTNQ15063 836 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 PLA2G4FQ68DD2 849 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 SH3RF1Q7Z6J0 888 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 PCDHA10Q9Y5I2 948 aa12.05□□□□□ -0.48
TDP1-211ENST00000555178 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 SEPT4O43236 478 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 MMP3P08254 477 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 NPEPPSP55786 919 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 CUL4BQ13620 913 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 HYIQ5T013 277 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 HAUS3Q68CZ6 603 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 LHX8Q68G74 356 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 KCNV1Q6PIU1 500 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 FUCA2Q9BTY2 467 aa12.04□□□□□ -0.48
TDP1-211ENST00000555178 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
TDP1-211ENST00000555178 AKR1A1P14550 325 aa12.03□□□□□ -0.48
TDP1-211ENST00000555178 ZNF445P59923 1031 aa12.03□□□□□ -0.48
TDP1-211ENST00000555178 ANO5Q75V66 913 aa12.03□□□□□ -0.48
TDP1-211ENST00000555178 CTU1Q7Z7A3 348 aaKnown RBP12.03□□□□□ -0.48
TDP1-211ENST00000555178 ERMNQ8TAM6 284 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms