RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 UBE2OQ9C0C9 1292 aaKnown RBP13.99□□□□□ -0.17
SYNE2-214ENST00000554928 BRMS1Q9HCU9 246 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 KCNMB3Q9NPA1 279 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 GAS7O60861 476 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 ACRP10323 421 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 CSF2RAP15509 400 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 ADAM17P78536 824 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 NBR1Q14596 966 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 PLCB4Q15147 1175 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 UGCGQ16739 394 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 SWSAP1Q6NVH7 229 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 TRAF7Q6Q0C0 670 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 RUFY4Q6ZNE9 571 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 LMBR1Q8WVP7 490 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 TMEM60Q9H2L4 133 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 SMARCAD1Q9H4L7 1026 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 TBC1D22BQ9NU19 505 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 VAV3Q9UKW4 847 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 SMC3Q9UQE7 1217 aa13.98□□□□□ -0.17
SYNE2-214ENST00000554928 C17orf102A2RUQ5 167 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 EML1O00423 815 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 BMP8BP34820 402 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 STAT5BP51692 787 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 IGBP1P78318 339 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 GPNMBQ14956 572 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 SHHQ15465 462 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 HABP4Q5JVS0 413 aaKnown RBP13.97□□□□□ -0.17
SYNE2-214ENST00000554928 MARCH8Q5T0T0 291 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 ZNF746Q6NUN9 644 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-214ENST00000554928 TRMT1LQ7Z2T5 733 aaKnown RBP13.97□□□□□ -0.17
SYNE2-214ENST00000554928 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 RIT2Q99578 217 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 TEKT3Q9BXF9 490 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 ZNF215Q9UL58 517 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-214ENST00000554928 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
SYNE2-214ENST00000554928 TRIOBPQ9H2D6 2365 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 SOX1O00570 391 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-214ENST00000554928 BACH1O14867 736 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 ZNF862O60290 1169 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 INSRRP14616 1297 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.17
SYNE2-214ENST00000554928 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-214ENST00000554928 KRT76Q01546 638 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 FPGSQ05932 587 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.17
SYNE2-214ENST00000554928 GRIK4Q16099 956 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 MIS18BP1Q6P0N0 1132 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 PLPPR4Q7Z2D5 763 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 SERINC5Q86VE9 423 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 ATP6V0A1Q93050 837 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 FOXP1Q9H334 677 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-214ENST00000554928 ZNF302Q9NR11 478 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 DISC1Q9NRI5 854 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 GABBR1Q9UBS5 961 aa13.96□□□□□ -0.17
SYNE2-214ENST00000554928 LAMA3Q16787 3333 aa13.96□□□□□ -0.18
SYNE2-214ENST00000554928 TMEM150BA6NC51 233 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 K7ELQ4 463 aaPredicted RBP13.95□□□□□ -0.18
SYNE2-214ENST00000554928 CKBP12277 381 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNE2-214ENST00000554928 MCM7P33993 719 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 PTK7Q13308 1070 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 MBTPS1Q14703 1052 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 ZNF174Q15697 407 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 TCTN1Q2MV58 587 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 ZNF618Q5T7W0 954 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 NOSTRINQ8IVI9 506 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 SMAP1Q8IYB5 467 aaPredicted RBP13.95□□□□□ -0.18
SYNE2-214ENST00000554928 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNE2-214ENST00000554928 AZI2Q9H6S1 392 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 SAMM50Q9Y512 469 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 PCDHA10Q9Y5I2 948 aa13.95□□□□□ -0.18
SYNE2-214ENST00000554928 MAFBQ9Y5Q3 323 aaPredicted RBP13.95□□□□□ -0.18
SYNE2-214ENST00000554928 IGSF9BQ9UPX0 1349 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 WDR64B1ANS9 1081 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 STBD1O95210 358 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 PSAPP07602 524 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 IQCF3P0C7M6 154 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 TMEM240Q5SV17 173 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 DEFB128Q7Z7B8 93 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 TDHQ8IZJ6 230 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 TMEM199Q8N511 208 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 SNX21Q969T3 373 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
SYNE2-214ENST00000554928 WRAP73Q9P2S5 460 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-214ENST00000554928 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms