RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 HIP1RO75146 1068 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 PLATP00750 562 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 C6orf222P0C671 652 aaPredicted RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 PYGMP11217 842 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 PTPN1P18031 435 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 MLLT6P55198 1093 aaPredicted RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 DBPQ10586 325 aaPredicted RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 BMS1Q14692 1282 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 RTP5Q14D33 572 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 ZNF827Q17R98 1081 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 SPATS1Q496A3 300 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 FNDC3BQ53EP0 1204 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 TRIM61Q5EBN2 209 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 CD276Q5ZPR3 534 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 ARHGEF18Q6ZSZ5 1173 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 UBE2R2Q712K3 238 aaPredicted RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 FERMT3Q86UX7 667 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 PTRH1Q86Y79 214 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 RBM12BQ8IXT5 1001 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 IFNL2Q8IZJ0 200 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 GSTCDQ8NEC7 633 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 YTHDC1Q96MU7 727 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 BDH2Q9BUT1 245 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 CELF4Q9BZC1 486 aaKnown RBP3.55□□□□□ -1.84
IFT43-208ENST00000554423 CD244Q9BZW8 370 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 FBXO10Q9UK96 956 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 PTCH2Q9Y6C5 1203 aa3.55□□□□□ -1.84
IFT43-208ENST00000554423 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.54□□□□□ -1.84
IFT43-208ENST00000554423 SLC12A8A0AV02 714 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 NPEPPSL1A6NEC2 478 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 PRAMEF25A6NGN4 478 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 ZNF839A8K0R7 811 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 LAMTOR5O43504 91 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 ITGB3P05106 788 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 GLRBP48167 497 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 JAM2P57087 298 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 PPP2CBP62714 309 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 PPP2CAP67775 309 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 NFATC3Q12968 1075 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 PUM1Q14671 1186 aaKnown RBP eCLIP3.54□□□□□ -1.84
IFT43-208ENST00000554423 TAF7LQ5H9L4 462 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 HHIPL2Q6UWX4 724 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 Q6ZUG5 572 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 REXO1L1PQ8IX06 675 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 KBTBD2Q8IY47 623 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 C2orf69Q8N8R5 385 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 CHST13Q8NET6 341 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 E2F7Q96AV8 911 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 SCYL1Q96KG9 808 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 ZSWIM3Q96MP5 696 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 SLC52A2Q9HAB3 445 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 CABP5Q9NP86 173 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 KCNH7Q9NS40 1196 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 ZFP69BQ9UJL9 534 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 INVSQ9Y283 1065 aa3.54□□□□□ -1.84
IFT43-208ENST00000554423 TCRBV16S1A1N1A0A5B0 115 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 ZNF561-AS1K7EIQ3 104 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 ACOT7O00154 380 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 MAN2B1O00754 1011 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 MAFGO15525 162 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 AKAP8O43823 692 aaKnown RBP3.53□□□□□ -1.84
IFT43-208ENST00000554423 PRICKLE3O43900 615 aaPredicted RBP3.53□□□□□ -1.84
IFT43-208ENST00000554423 B4GALT4O60513 344 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 KNG1P01042 644 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 LTFP02788 710 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 ASLP04424 464 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 PTGS1P23219 599 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 IGFALSP35858 605 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 RANGAP1P46060 587 aaPredicted RBP3.53□□□□□ -1.84
IFT43-208ENST00000554423 WDR72Q3MJ13 1102 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 CCDC144BQ3MJ40 725 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 PKN3Q6P5Z2 889 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 RALYLQ86SE5 291 aaKnown RBP3.53□□□□□ -1.84
IFT43-208ENST00000554423 PROSER1Q86XN7 944 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 HOMER1Q86YM7 354 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 LILRB2Q8N423 598 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 STPG3Q8N7X2 389 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 SLC7A14Q8TBB6 771 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 CALML6Q8TD86 181 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 AJUBAQ96IF1 538 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 SAMD11Q96NU1 681 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 SYT3Q9BQG1 590 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 CARD11Q9BXL7 1154 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 NCOA5Q9HCD5 579 aaKnown RBP3.53□□□□□ -1.84
IFT43-208ENST00000554423 INCENPQ9NQS7 918 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 GALNT8Q9NY28 637 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 ADAM29Q9UKF5 820 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 CBLCQ9ULV8 474 aa3.53□□□□□ -1.84
IFT43-208ENST00000554423 TCRBV5S4A2TA0A5A2 114 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 FAM90A27PA6NNH2 459 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 OPA1O60313 960 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 RFPL3O75679 317 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 RASGRP1O95267 797 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 AMY2AP04746 511 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 INSRRP14616 1297 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 AMY2BP19961 511 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 POLD1P28340 1107 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 MAP3K12Q12852 859 aa3.52□□□□□ -1.85
IFT43-208ENST00000554423 USP10Q14694 798 aaKnown RBP3.52□□□□□ -1.85
IFT43-208ENST00000554423 TCEA2Q15560 299 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms