RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 AFF2P51816 1311 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 A0A087X0B3 334 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 FITM1A5D6W6 292 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 PDE8AO60658 829 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 FUCA1P04066 466 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 SOD2P04179 222 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 ASLP04424 464 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 RNASE1P07998 156 aaKnown RBP6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 TRHRP34981 398 aaPredicted RBP6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 IGFALSP35858 605 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 NEK4P51957 841 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 ANAPC15P60006 121 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 PAK1Q13153 545 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 ZNF792Q3KQV3 632 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 HSP90AB4PQ58FF6 505 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 GALNT18Q6P9A2 607 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 CEP68Q76N32 757 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 UBR7Q8N806 425 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 NUP43Q8NFH3 380 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 DPF3Q92784 378 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 METTL14Q9HCE5 456 aaKnown RBP6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 ZFP64Q9NPA5 681 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 CLDND1Q9NY35 253 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 MARCH2Q9P0N8 246 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 COL4A3BPQ9Y5P4 624 aa6.62□□□□□ -1.35
MTHFD1-206ENST00000554353 PRAG1Q86YV5 1406 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 A0A1W2PQJ5 194 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 PPP1R11O60927 126 aaPredicted RBP6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 JMJD7P0C870 316 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 RAC2P15153 192 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 PRKCAP17252 672 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 FPR2P25090 351 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 TACR1P25103 407 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 FLT3P36888 993 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 GTF2A2P52657 109 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 CT47A1Q5JQC4 288 aaPredicted RBP6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 THNSL2Q86YJ6 484 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 TRMT2BQ96GJ1 504 aaKnown RBP6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 TMEM169Q96HH4 297 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 ORAI2Q96SN7 254 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 KCNJ15Q99712 375 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 PLCD4Q9BRC7 762 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 TMX1Q9H3N1 280 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 IPPKQ9H8X2 491 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 C19orf73Q9NVV2 129 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
MTHFD1-206ENST00000554353 C1orf167Q5SNV9 1468 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 PTCH1Q13635 1447 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 GPRASP1Q5JY77 1395 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 PNPLA6Q8IY17 1366 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 A0A0U1RQG5 324 aaPredicted RBP6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 HMGB1P1B2RPK0 211 aaPredicted RBP6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 B4E1Z4 1266 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 C22orf46C9J442 243 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 FAM47E-STBD1D6RA91 191 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 ARVCFO00192 962 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 NRDCO43847 1150 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 KPNA6O60684 536 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 PARNO95453 639 aaKnown RBP6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 GRK2P25098 689 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 GRK3P35626 688 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 GDNFP39905 211 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 CFAP100Q494V2 611 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 TIGD5Q53EQ6 642 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 UBE2R2Q712K3 238 aaPredicted RBP6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 SIRT2Q8IXJ6 389 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 PCDH19Q8TAB3 1148 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 ZCRB1Q8TBF4 217 aaKnown RBP6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 DDX1Q92499 740 aaKnown RBP6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 JAM3Q9BX67 310 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 COQ6Q9Y2Z9 468 aa6.6□□□□□ -1.35
MTHFD1-206ENST00000554353 CCDC144AA2RUR9 1427 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 RGPD8O14715 1765 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 IFT172Q9UG01 1749 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 ROCK2O75116 1388 aaKnown RBP6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 GSG1L2A8MUP6 293 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 PSPNO60542 156 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 HPXP02790 462 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 MSL3P1P0C860 447 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 PTMSP20962 102 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 DNM2P50570 870 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 GALK1P51570 392 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 RBM6P78332 1123 aaKnown RBP6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 ST5P78524 1137 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 MVKQ03426 396 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 RGL3Q3MIN7 710 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 PIK3R6Q5UE93 754 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 CDCA2Q69YH5 1023 aaPredicted RBP6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 ZCCHC8Q6NZY4 707 aaKnown RBP6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 DDX53Q86TM3 631 aaKnown RBP6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 PPM1KQ8N3J5 372 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 LZTR1Q8N653 840 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 IGSF22Q8N9C0 903 aa6.59□□□□□ -1.35
MTHFD1-206ENST00000554353 LEO1Q8WVC0 666 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms