RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
TMEM253-203ENST00000554329 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
TMEM253-203ENST00000554329 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 LOXHD1Q8IVV2 1947 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 M0R2N6 131 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
TMEM253-203ENST00000554329 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 WNT7AO00755 349 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 BACH1O14867 736 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 MSH4O15457 936 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 SLC37A4O43826 429 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 CYP3A4P08684 503 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 PLCB4Q15147 1175 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 PIK3AP1Q6ZUJ8 805 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 GIMAP8Q8ND71 665 aaPredicted RBP13.16□□□□□ -0.3
TMEM253-203ENST00000554329 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 SEMA6BQ9H3T3 888 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 SLC4A7Q9Y6M7 1214 aa13.16□□□□□ -0.3
TMEM253-203ENST00000554329 NFASCO94856 1347 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 INSRRP14616 1297 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 ATP4AP20648 1035 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 IBSPP21815 317 aaPredicted RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 HOXC8P31273 242 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 ADAM17P78536 824 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 GRIN2CQ14957 1233 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 UGCGQ16739 394 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 LETM2Q2VYF4 491 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 MARCH8Q5T0T0 291 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.3
TMEM253-203ENST00000554329 SH2D3AQ9BRG2 576 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 ERAP1Q9NZ08 941 aa13.15□□□□□ -0.3
TMEM253-203ENST00000554329 REV3LO60673 3130 aa13.15□□□□□ -0.31
TMEM253-203ENST00000554329 SPTBN5Q9NRC6 3674 aaKnown RBP13.15□□□□□ -0.31
TMEM253-203ENST00000554329 EMSYQ7Z589 1322 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 RSPH10B2B2RC85 870 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 LGR5O75473 907 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 CDKL5O76039 1030 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 RSPH10BP0C881 870 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
TMEM253-203ENST00000554329 STAT5BP51692 787 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 ABHD15Q6UXT9 468 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 DBF4BQ8NFT6 615 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 ZNF668Q96K58 619 aaPredicted RBP13.14□□□□□ -0.31
TMEM253-203ENST00000554329 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 SAMM50Q9Y512 469 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
TMEM253-203ENST00000554329 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 EVPLQ92817 2033 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 MYH9P35579 1960 aaKnown RBP13.13□□□□□ -0.31
TMEM253-203ENST00000554329 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 RFXAPO00287 272 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 MAFGO15525 162 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 CHRNA1P02708 482 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 GHRP10912 638 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
TMEM253-203ENST00000554329 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM253-203ENST00000554329 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 PRDM12Q9H4Q4 367 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 ZNF302Q9NR11 478 aa13.13□□□□□ -0.31
TMEM253-203ENST00000554329 CCDC194A0A1B0GVG4 234 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 CCNT1O60563 726 aaKnown RBP13.12□□□□□ -0.31
TMEM253-203ENST00000554329 ATG7O95352 703 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 CA3P07451 260 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 ATP2B1P20020 1258 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 CIITAP33076 1130 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
TMEM253-203ENST00000554329 RBL2Q08999 1139 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
TMEM253-203ENST00000554329 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms