RNA–Protein interactions for RNA: ENST00000554034.5

CDH24-205, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH24, Length 2,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-205ENST00000554034 SF3A3Q12874 501 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDH24-205ENST00000554034 B4GALNT4Q76KP1 1039 aa20.71■□□□□ 0.91
CDH24-205ENST00000554034 IRF2BP2Q7Z5L9 587 aa20.71■□□□□ 0.91
CDH24-205ENST00000554034 SYN2Q92777 582 aaPredicted RBP20.71■□□□□ 0.91
CDH24-205ENST00000554034 MYH4Q9Y623 1939 aa20.71■□□□□ 0.91
CDH24-205ENST00000554034 SART1O43290 800 aaKnown RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 CYP11B2P19099 503 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 ARSHQ5FYA8 562 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 WHAMMQ8TF30 809 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 UBLCP1Q8WVY7 318 aaPredicted RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 CDCA7Q9BWT1 371 aaPredicted RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 TRIM31Q9BZY9 425 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 NUCKS1Q9H1E3 243 aaKnown RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 AIPL1Q9NZN9 384 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 MED24O75448 989 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 CTNNA1P35221 906 aaKnown RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 RFC4P35249 363 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 MREGQ8N565 214 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 METTL13Q8N6R0 699 aa20.7■□□□□ 0.9
CDH24-205ENST00000554034 RTCBQ9Y3I0 505 aaKnown RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 NOC2LQ9Y3T9 749 aaKnown RBP20.7■□□□□ 0.9
CDH24-205ENST00000554034 UCHL3P15374 230 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 FNTAP49354 379 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 ADAT2Q7Z6V5 191 aaKnown RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 CEP63Q96MT8 703 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 TMEM59LQ9UK28 342 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 DAPK3O43293 454 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 TAL1P17542 331 aaPredicted RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 HSPA9P38646 679 aaKnown RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 PABPC4Q13310 644 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDH24-205ENST00000554034 ORC2Q13416 577 aaPredicted RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 MCTP2Q6DN12 878 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 ALKBH5Q6P6C2 394 aaKnown RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 SUGP1Q8IWZ8 645 aaKnown RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 ARHGEF1Q92888 912 aaKnown RBP20.69■□□□□ 0.9
CDH24-205ENST00000554034 LRRC27Q9C0I9 530 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 DPH5Q9H2P9 285 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 NAGPAQ9UK23 515 aa20.69■□□□□ 0.9
CDH24-205ENST00000554034 COPB2P35606 906 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 GRAPQ13588 217 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 PPP4R3AQ6IN85 833 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 CHADLQ6NUI6 762 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 GRAPLQ8TC17 118 aaPredicted RBP20.68■□□□□ 0.9
CDH24-205ENST00000554034 ISCUQ9H1K1 167 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 PSTPIP2Q9H939 334 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 TMBIM4Q9HC24 238 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 FBXL5Q9UKA1 691 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 GOLGA6L10A6NI86 522 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 CASP4P49662 377 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 ZNF844Q08AG5 666 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 KCNA1Q09470 495 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 SPRED3Q2MJR0 410 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 CUL5Q93034 780 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 GCOM1H8Y6P7 765 aaPredicted RBP20.68■□□□□ 0.9
CDH24-205ENST00000554034 MPHOSPH10O00566 681 aaKnown RBP20.68■□□□□ 0.9
CDH24-205ENST00000554034 CETN3O15182 167 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 MYZAPP0CAP1 466 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 MYBP10242 640 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 IBSPP21815 317 aaPredicted RBP20.68■□□□□ 0.9
CDH24-205ENST00000554034 USP11P51784 963 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 SNAP25P60880 206 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 SHROOM1Q2M3G4 852 aaPredicted RBP20.68■□□□□ 0.9
CDH24-205ENST00000554034 ODF2Q5BJF6 829 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 GPATCH11Q8N954 259 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 MYH7BA7E2Y1 1941 aa20.68■□□□□ 0.9
CDH24-205ENST00000554034 PNMA6FA0A0J9YX94 578 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 KRIT1O00522 736 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 TTI1O43156 1089 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 IRX3P78415 501 aaPredicted RBP20.67■□□□□ 0.9
CDH24-205ENST00000554034 QPCTQ16769 361 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 CD302Q8IX05 232 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 LRRC57Q8N9N7 239 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 EP400Q96L91 3159 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 TNRC6CQ9HCJ0 1690 aaKnown RBP20.67■□□□□ 0.9
CDH24-205ENST00000554034 HMGB1P1B2RPK0 211 aaPredicted RBP20.67■□□□□ 0.9
CDH24-205ENST00000554034 CLIC2O15247 247 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 SMARCA1P28370 1054 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 HOXD13P35453 343 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 SLC30A10Q6XR72 485 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 PAXIP1Q6ZW49 1069 aaPredicted RBP20.67■□□□□ 0.9
CDH24-205ENST00000554034 SFR1Q86XK3 245 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 CNPY4Q8N129 248 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 PRPF38AQ8NAV1 312 aaKnown RBP20.67■□□□□ 0.9
CDH24-205ENST00000554034 CNOT8Q9UFF9 292 aaKnown RBP20.67■□□□□ 0.9
CDH24-205ENST00000554034 NR2E1Q9Y466 385 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 SBF2Q86WG5 1849 aa20.67■□□□□ 0.9
CDH24-205ENST00000554034 H0YGN5 161 aa20.66■□□□□ 0.9
CDH24-205ENST00000554034 ATP2C2O75185 946 aa20.66■□□□□ 0.9
CDH24-205ENST00000554034 PON1P27169 355 aa20.66■□□□□ 0.9
CDH24-205ENST00000554034 CLK2P49760 499 aaKnown RBP20.66■□□□□ 0.9
CDH24-205ENST00000554034 ZNF543Q08ER8 600 aa20.66■□□□□ 0.9
CDH24-205ENST00000554034 SF3B2Q13435 895 aaKnown RBP20.66■□□□□ 0.9
CDH24-205ENST00000554034 EXOC3L4Q17RC7 722 aa20.66■□□□□ 0.9
CDH24-205ENST00000554034 SCFD2Q8WU76 684 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms