RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 STIM2Q9P246 746 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 HDAC9Q9UKV0 1011 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 ESYT3A0FGR9 886 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 SPDYE3A6NKU9 549 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 SPATA31C1P0DKV0 1188 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 MYBP10242 640 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 AMNQ9BXJ7 453 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 NUCKS1Q9H1E3 243 aaKnown RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 GOLPH3Q9H4A6 298 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 CYP3A7-CYP3A51PA0A087WV96 503 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 NPR1P16066 1061 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 CYP3A7P24462 503 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 KCNA1Q09470 495 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 ASIC2Q16515 512 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 TCERG1LQ5VWI1 586 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 DCAF4Q8WV16 495 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 LENG9Q96B70 501 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 ZDHHC15Q96MV8 337 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 GLT8D2Q9H1C3 349 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 TMX4Q9H1E5 349 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 CWC15Q9P013 229 aaKnown RBP16.01■□□□□ 0.15
ACTN1-211ENST00000553882 UTRNP46939 3433 aa16.01■□□□□ 0.15
ACTN1-211ENST00000553882 FRMD3A2A2Y4 597 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 SFI1A8K8P3 1242 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 NDUFB10O96000 172 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 HOXD13P35453 343 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 MARSP56192 900 aaKnown RBP16■□□□□ 0.15
ACTN1-211ENST00000553882 ITIH3Q06033 890 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 SYN2Q92777 582 aaPredicted RBP16■□□□□ 0.15
ACTN1-211ENST00000553882 GANQ9H2C0 597 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 NYAP2Q9P242 653 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 ARMCX3Q9UH62 379 aaPredicted RBP16■□□□□ 0.15
ACTN1-211ENST00000553882 HOXA7P31268 230 aaPredicted RBP16■□□□□ 0.15
ACTN1-211ENST00000553882 PTK2Q05397 1052 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 NAB2Q15742 525 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 KNOP1Q1ED39 458 aaKnown RBP16■□□□□ 0.15
ACTN1-211ENST00000553882 FBXO11Q86XK2 927 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 MKL1Q969V6 931 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 SPAG5Q96R06 1193 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 RGL1Q9NZL6 768 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 SPATA31A6Q5VVP1 1343 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
ACTN1-211ENST00000553882 SMCHD1A6NHR9 2005 aa16■□□□□ 0.15
ACTN1-211ENST00000553882 RPA1P27694 616 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 JAG1P78504 1218 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 AP3B2Q13367 1082 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 EDRF1Q3B7T1 1238 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 LRRC31Q6UY01 552 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 ERMNQ8TAM6 284 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 MBOAT7Q96N66 472 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 LUC7LQ9NQ29 371 aaKnown RBP15.99■□□□□ 0.15
ACTN1-211ENST00000553882 PITPNM2Q9BZ72 1349 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 FAM170AA1A519 330 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 GOLGA6CA6NDK9 693 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 CLIC2O15247 247 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 AKAP3O75969 853 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 GLI1P08151 1106 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 GOLGA6DP0CG33 693 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 KCTD19Q17RG1 926 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-211ENST00000553882 SYT2Q8N9I0 419 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-211ENST00000553882 TSEN2Q8NCE0 465 aaKnown RBP15.99■□□□□ 0.15
ACTN1-211ENST00000553882 RUSC1Q9BVN2 902 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 GOLGA6AQ9NYA3 693 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 QSER1Q2KHR3 1735 aa15.99■□□□□ 0.15
ACTN1-211ENST00000553882 TULP2O00295 520 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 MSH4O15457 936 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ONECUT3O60422 494 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-211ENST00000553882 GCNT3O95395 438 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 UCHL3P15374 230 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 CASP4P49662 377 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ABCB5Q2M3G0 1257 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 MSL1Q68DK7 614 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 PIGOQ8TEQ8 1089 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 IFT81Q8WYA0 676 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 AIPL1Q9NZN9 384 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 EML1O00423 815 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 CHMP2AO43633 222 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 GH2P01242 217 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 XRCC5P13010 732 aaKnown RBP15.98■□□□□ 0.15
ACTN1-211ENST00000553882 POLD1P28340 1107 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ZNF76P36508 570 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 EXOC3L4Q17RC7 722 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ZNF571Q7Z3V5 609 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms