RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 DOK7Q18PE1 504 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 KIAA0753Q2KHM9 967 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 EMBQ6PCB8 327 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC30A10Q6XR72 485 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PAXIP1Q6ZW49 1069 aaPredicted RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZNF571Q7Z3V5 609 aaPredicted RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 SFR1Q86XK3 245 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 CCDC65Q8IXS2 484 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 RNF10Q8N5U6 811 aaKnown RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PROCA1Q8NCQ7 364 aaPredicted RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 RBM46Q8TBY0 533 aaKnown RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 RUBCNQ92622 972 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 SYN2Q92777 582 aaPredicted RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 KRT12Q99456 494 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 LRRC27Q9C0I9 530 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 DHX36Q9H2U1 1008 aaKnown RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 GDF3Q9NR23 364 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 EMILIN3Q9NT22 766 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 HDAC9Q9UKV0 1011 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 SCN9AQ15858 1988 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 MEIS2O14770 477 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PPEF1O14829 653 aaPredicted RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PTK2Q05397 1052 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 KLHL30Q0D2K2 578 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PABPC4Q13310 644 aaKnown RBP eCLIP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 ADAM9Q13443 819 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 SEPT2Q15019 361 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 ASIC2Q16515 512 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 CDC37Q16543 378 aaPredicted RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 CFAP221Q4G0U5 840 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 KCTD16Q68DU8 428 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 CATSPER3Q86XQ3 398 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 ETNPPLQ8TBG4 499 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PIK3R5Q8WYR1 880 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 LENG9Q96B70 501 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 CCDC43Q96MW1 224 aaKnown RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 REEP2Q9BRK0 252 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 NT5C3AQ9H0P0 336 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 EPB41L5Q9HCM4 733 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PCDHA1Q9Y5I3 950 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZNF233A6NK53 670 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 POLRMTO00411 1230 aaKnown RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 RAD51CO43502 376 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 KRT18P05783 430 aaKnown RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 SPATA31C1P0DKV0 1188 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 HOXA10P31260 410 aaPredicted RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CCT5P48643 541 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 GNGT1P63211 74 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 KCNA1Q09470 495 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 PDCLQ13371 301 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 GIT2Q14161 759 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 PRR16Q569H4 304 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 GPATCH4Q5T3I0 446 aaKnown RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 APOBEC3HQ6NTF7 200 aaKnown RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 GJB7Q6PEY0 223 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 IRF2BP2Q7Z5L9 587 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CRYGNQ8WXF5 182 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 BBXQ8WY36 941 aaPredicted RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 IFT81Q8WYA0 676 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 MBOAT7Q96N66 472 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 TSPYL1Q9H0U9 437 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 KCNQ5Q9NR82 932 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 AIPL1Q9NZN9 384 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 SWAP70Q9UH65 585 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ASTN1O14525 1302 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 MYO3BQ8WXR4 1341 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 GOLGA8KD6RF30 607 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 FAM86B1E9PN63 330 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 EIF3HO15372 352 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 BBOX1O75936 387 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 AKAP3O75969 853 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 FAM86B2P0C5J1 330 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZBTB48P10074 688 aaPredicted RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 EEF2P13639 858 aaKnown RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ECHS1P30084 290 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CASP4P49662 377 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CORO7P57737 925 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ARHGAP4P98171 946 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CYP4A11Q02928 519 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 TCP10Q12799 353 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 PPFIA1Q13136 1202 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 USH1GQ495M9 461 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 DCAF17Q5H9S7 520 aaPredicted RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 EPM2AIP1Q7L775 607 aaPredicted RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 KLHL7Q8IXQ5 586 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 OLIG1Q8TAK6 271 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 CAPS2Q9BXY5 557 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 SIX2Q9NPC8 291 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 BMP2KQ9NSY1 1161 aaPredicted RBP7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 USP21Q9UK80 565 aa7.61□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZMYM2Q9UBW7 1377 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 DDTLA6NHG4 134 aaPredicted RBP7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 HSF2BPO75031 334 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 GNA14O95837 355 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 EPB41P11171 864 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms