RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C16orf59Q7L2K0 433 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 RALYLQ86SE5 291 aaKnown RBP6.14□□□□□ -1.43
SCFD1-210ENST00000553693 REXO1L1PQ8IX06 675 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 ZSWIM2Q8NEG5 633 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 SH3RF2Q8TEC5 729 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 GPR20Q99678 358 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 RIC8BQ9NVN3 520 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 ADAM29Q9UKF5 820 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 CCDC163A0A0D9SF12 145 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 CCDC66A2RUB6 948 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 H0Y858 1186 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 ACOT7O00154 380 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 CRTAMO95727 393 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 PYGMP11217 842 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 PDE6AP16499 860 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 EPHB4P54760 987 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 ADAM17P78536 824 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 DBPQ10586 325 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-210ENST00000553693 PHF19Q5T6S3 580 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 Q6ZUG5 572 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 PTRH1Q86Y79 214 aaKnown RBP6.13□□□□□ -1.43
SCFD1-210ENST00000553693 STPG3Q8N7X2 389 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 CHST13Q8NET6 341 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 NUDT10Q8NFP7 164 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 KISS1RQ969F8 398 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-210ENST00000553693 NUDT11Q96G61 164 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 JADE2Q9NQC1 790 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 ARHGAP28Q9P2N2 729 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 NDOR1Q9UHB4 597 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 PCDHA9Q9Y5H5 950 aa6.13□□□□□ -1.43
SCFD1-210ENST00000553693 TCRBV5S4A2TA0A5A2 114 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 NPEPPSL1A6NEC2 478 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 MAN2B1O00754 1011 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 SRGAP2CP0DJJ0 459 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 KRT15P19012 456 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 PPP2CBP62714 309 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 PPP2CAP67775 309 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 DPP8Q6V1X1 898 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-210ENST00000553693 IFNL2Q8IZJ0 200 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 DNAJC7Q99615 494 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 SFMBT1Q9UHJ3 866 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 CBLCQ9ULV8 474 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 ZDHHC9Q9Y397 364 aa6.12□□□□□ -1.43
SCFD1-210ENST00000553693 FAM90A27PA6NNH2 459 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 AMY2AP04746 511 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 AMY2BP19961 511 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 DNM2P50570 870 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 ZNF568Q3ZCX4 644 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 SLFN13Q68D06 897 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 OSTM1Q86WC4 334 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 CIR1Q86X95 450 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-210ENST00000553693 GSTCDQ8NEC7 633 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 THAP3Q8WTV1 239 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-210ENST00000553693 AJUBAQ96IF1 538 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 MAGEB10Q96LZ2 347 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-210ENST00000553693 C8orf49Q96NF6 230 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
SCFD1-210ENST00000553693 SLC52A2Q9HAB3 445 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 SLC39A2Q9NP94 309 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 PPP4R1LQ9P1A2 415 aa6.11□□□□□ -1.43
SCFD1-210ENST00000553693 B4GALT4O60513 344 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 CUTAO60888 179 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 TNFRSF1AP19438 455 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 JAM2P57087 298 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 HERVK_113P62684 666 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 ZXDAP98168 799 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 C2orf27AQ580R0 203 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 TRIM61Q5EBN2 209 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 CPZQ66K79 652 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 LIMS2Q7Z4I7 341 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 PMFBP1Q8TBY8 1022 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 SREK1Q8WXA9 508 aaKnown RBP6.1□□□□□ -1.43
SCFD1-210ENST00000553693 SSBP3Q9BWW4 388 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-210ENST00000553693 C1QTNF3Q9BXJ4 246 aa6.1□□□□□ -1.43
SCFD1-210ENST00000553693 MRPL4Q9BYD3 311 aaKnown RBP6.1□□□□□ -1.43
SCFD1-210ENST00000553693 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 PRAMEF25A6NGN4 478 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 CLASP2O75122 1294 aaKnown RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 IL18BPO95998 194 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 ZNF20P17024 532 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 PTGS1P23219 599 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 CSF2RBP32927 897 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 LACTBP83111 547 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 USP10Q14694 798 aaKnown RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 CISD2Q8N5K1 135 aaKnown RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 DVL3Q92997 716 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 CELF4Q9BZC1 486 aaKnown RBP6.09□□□□□ -1.43
SCFD1-210ENST00000553693 KATNBL1Q9H079 304 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 OSBPL2Q9H1P3 480 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 SEC61A2Q9H9S3 476 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 SMURF1Q9HCE7 757 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 SLC4A7Q9Y6M7 1214 aa6.09□□□□□ -1.43
SCFD1-210ENST00000553693 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-210ENST00000553693 NPTXRO95502 500 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 AOAHP28039 575 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 POLD1P28340 1107 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 NFE2L2Q16236 605 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 CARD11Q9BXL7 1154 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms